Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS50Q96JG6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 RNU6-23P-201ENST00000363283 107 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 RNU6-763P-201ENST00000390865 106 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 SNORA26.5-201ENST00000391215 123 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AL117342.1-201ENST00000404861 406 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS50Q96JG6 U8.19-201ENST00000459095 133 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 Y_RNA.637-201ENST00000459424 114 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.22□□□□□ -2.05
VPS50Q96JG6 YWHAEP4-201ENST00000505390 198 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS50Q96JG6 SNORD116-28-201ENST00000516123 91 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AP005660.1-201ENST00000522972 293 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 MIR4438-201ENST00000585271 93 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC104984.5-201ENST00000586878 94 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 AL162424.1-201ENST00000602325 221 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 BX284668.6-201ENST00000606899 438 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS50Q96JG6 snoU18.1-201ENST00000629629 71 ntBASIC2.22□□□□□ -2.05
VPS50Q96JG6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS50Q96JG6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VPS50Q96JG6 RNU1-58P-201ENST00000362413 163 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 RNU6-862P-201ENST00000362804 105 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 Y_RNA.122-201ENST00000363331 96 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 RNU6-136P-201ENST00000384663 107 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 SNORD58.1-201ENST00000391313 66 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 MIR1283-2-201ENST00000408621 87 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS50Q96JG6 AC099677.2-201ENST00000436385 175 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AL353689.1-201ENST00000438895 199 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 SUMO1P2-201ENST00000452524 304 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 SUMO2P18-201ENST00000518873 252 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 MIR1273D-201ENST00000577266 86 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS50Q96JG6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS50Q96JG6 AL008718.3-201ENST00000610217 321 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS50Q96JG6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 AC134026.1-201ENST00000623249 2239 ntBASIC2.21□□□□□ -2.06
VPS50Q96JG6 RNU6-1272P-201ENST00000362776 107 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 RNU1-22P-201ENST00000363334 158 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 RNU2-40P-201ENST00000410833 196 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS50Q96JG6 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC024067.1-201ENST00000426199 223 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 BTF3P11-201ENST00000426582 477 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC108059.2-201ENST00000434626 151 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 RPS20P10-201ENST00000451209 253 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 UBL5P3-201ENST00000475112 231 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC136628.3-201ENST00000521868 290 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 U6.73-201ENST00000619194 103 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC006435.5-201ENST00000624486 112 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
VPS50Q96JG6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VPS50Q96JG6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS50Q96JG6 AC008555.8-201ENST00000623602 2168 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 SNORD114-7-201ENST00000362520 77 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNU6-271P-201ENST00000363858 105 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 Y_RNA.257-201ENST00000364596 102 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNU6-117P-201ENST00000365415 107 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS50Q96JG6 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 Y_RNA.590-201ENST00000410140 107 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNU6-710P-201ENST00000410424 105 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS50Q96JG6 AC097462.1-201ENST00000514125 324 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 RNU7-128P-201ENST00000517247 62 ntBASIC2.19□□□□□ -2.06
VPS50Q96JG6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS50Q96JG6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS50Q96JG6 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms