Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC009238.1-201ENST00000442165 424 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC025750.2-201ENST00000442609 450 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC009237.6-201ENST00000446969 424 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC245102.2-201ENST00000448956 180 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 MIR4438-201ENST00000585271 93 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 AL162274.2-201ENST00000614406 332 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 MIR622-201ENST00000638396 96 ntBASIC2.62□□□□□ -1.99
NEIL1Q96FI4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEIL1Q96FI4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RNU6-834P-201ENST00000362367 110 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RNU1-23P-201ENST00000363361 144 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RNU6-743P-201ENST00000364151 106 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 SNORA46-201ENST00000384762 135 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 AL357134.1-201ENST00000445848 426 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RNU7-172P-201ENST00000517125 64 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 AL160236.1-201ENST00000556317 195 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 RPL23AP91-201ENST00000569211 455 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 MIR3200-201ENST00000580767 85 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 MIR4325-201ENST00000583049 90 ntBASIC2.61□□□□□ -1.99
NEIL1Q96FI4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.61□□□□□ -1.99
NEIL1Q96FI4 AC108206.1-201ENST00000570186 4159 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 MIR422A-201ENST00000362286 90 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 SNORA25.7-201ENST00000364375 127 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 SNORD77.4-201ENST00000516158 81 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 UBL5P2-201ENST00000583788 219 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 uc_338.4-201ENST00000616635 176 ntBASIC2.6□□□□□ -1.99
NEIL1Q96FI4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NEIL1Q96FI4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 SNORA26.7-201ENST00000391288 122 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 SNORD11-201ENST00000459124 84 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 RN7SKP179-201ENST00000516126 217 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 RNA5SP341-201ENST00000516261 117 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 AC090049.2-201ENST00000550377 109 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.59□□□□□ -1.99
NEIL1Q96FI4 MIR2681-201ENST00000581814 105 ntBASIC2.59□□□□□ -1.99
NEIL1Q96FI4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.59□□□□□ -1.99
NEIL1Q96FI4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.59□□□□□ -2
NEIL1Q96FI4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.59□□□□□ -2
NEIL1Q96FI4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
NEIL1Q96FI4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NEIL1Q96FI4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NEIL1Q96FI4 MIR340-201ENST00000362125 95 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-235P-201ENST00000362644 107 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-525P-201ENST00000363685 104 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 SNORA71.1-201ENST00000364523 117 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-1056P-201ENST00000383996 107 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AC123900.1-201ENST00000420390 96 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AC063976.3-201ENST00000426849 329 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AP001486.1-201ENST00000463339 476 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-991P-201ENST00000516168 107 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNA5SP153-201ENST00000516498 76 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 RNU6-856P-201ENST00000516959 98 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AC011604.1-201ENST00000545978 196 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NEIL1Q96FI4 AL391516.1-201ENST00000554380 2449 ntBASIC2.58□□□□□ -2
NEIL1Q96FI4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NEIL1Q96FI4 U8.1-201ENST00000362843 134 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNU2-70P-201ENST00000410718 179 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNA5SP344-201ENST00000411081 104 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 Z92545.1-201ENST00000411782 234 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 AL158823.1-201ENST00000418441 478 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms