| HOOK2 | Q96ED9 | CFLAR-AS1-202 | ENST00000474886 | 223 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | Y_RNA.676-201 | ENST00000516393 | 96 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | RNU6-966P-201 | ENST00000516479 | 104 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | RPL21P9-201 | ENST00000556149 | 474 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | AC037487.3-201 | ENST00000606668 | 112 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.02 | | |
| HOOK2 | Q96ED9 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-290P-201 | ENST00000365212 | 101 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-1105P-201 | ENST00000384774 | 107 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR520A-201 | ENST00000384862 | 85 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR17-201 | ENST00000385012 | 84 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL162411.1-201 | ENST00000413145 | 526 nt | TSL 2 BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | EBAG9P1-201 | ENST00000418955 | 543 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC069079.1-201 | ENST00000419889 | 400 nt | TSL 3 BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | HSPE1P25-201 | ENST00000455484 | 251 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU7-94P-201 | ENST00000459576 | 63 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RPS26P45-201 | ENST00000471748 | 340 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC009930.1-201 | ENST00000522330 | 191 nt | TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC084364.2-201 | ENST00000546924 | 395 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AP000942.3-201 | ENST00000603702 | 160 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC005034.5-201 | ENST00000604219 | 466 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP276-201 | ENST00000362580 | 94 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.124-201 | ENST00000363339 | 93 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.286-201 | ENST00000364813 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL139156.1-201 | ENST00000412785 | 841 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC104435.1-201 | ENST00000483483 | 166 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC110009.1-201 | ENST00000512965 | 451 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.783-201 | ENST00000613546 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | snoU2_19.2-201 | ENST00000363024 | 80 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-1309P-201 | ENST00000363305 | 108 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-238P-201 | ENST00000363313 | 106 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.569-201 | ENST00000384749 | 103 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RPL21P38-201 | ENST00000418090 | 167 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC245047.4-201 | ENST00000433189 | 144 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AP003715.1-201 | ENST00000532109 | 435 nt | TSL 3 BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | LINC00643-201 | ENST00000334389 | 3247 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.26-201 | ENST00000362539 | 101 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.136-201 | ENST00000363444 | 102 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-102P-201 | ENST00000384485 | 104 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-376P-201 | ENST00000384731 | 106 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR1302-3-201 | ENST00000408128 | 138 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP100-201 | ENST00000410903 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP59-201 | ENST00000410922 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC098869.1-201 | ENST00000481627 | 292 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MTCO2P24-201 | ENST00000515611 | 426 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU7-128P-201 | ENST00000517247 | 62 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | PTPN22-206 | ENST00000525799 | 2118 nt | TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | DEFB117-201 | ENST00000602356 | 141 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR8062-201 | ENST00000621515 | 85 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | U6.108-201 | ENST00000637764 | 58 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.47-201 | ENST00000362697 | 108 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.133-201 | ENST00000363428 | 110 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-326P-201 | ENST00000365480 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC009310.1-201 | ENST00000414414 | 451 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | LINC01701-201 | ENST00000419614 | 451 nt | TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL445685.2-201 | ENST00000422551 | 342 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | HMGN1P10-201 | ENST00000474557 | 553 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP481-201 | ENST00000516814 | 122 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU2-31P-201 | ENST00000516954 | 155 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.84-201 | ENST00000363011 | 104 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | Y_RNA.140-201 | ENST00000363474 | 103 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | CLDN10-202 | ENST00000376855 | 701 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | TRAJ48-201 | ENST00000390489 | 63 nt | APPRIS P1 BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MIR1302-6-201 | ENST00000408466 | 90 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | MTCYBP9-201 | ENST00000431021 | 303 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| HOOK2 | Q96ED9 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.35 | □□□□□ -2.03 | | |