Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF428Q96B54 AL442067.1-201ENST00000613261 223 ntBASIC3.08□□□□□ -1.92
ZNF428Q96B54 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.08□□□□□ -1.92
ZNF428Q96B54 AC022513.1-201ENST00000624512 117 ntBASIC3.08□□□□□ -1.92
ZNF428Q96B54 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF428Q96B54 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ZNF428Q96B54 Y_RNA.329-201ENST00000365209 107 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 SNORA70B-201ENST00000384210 135 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 MIR520A-201ENST00000384862 85 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 FTH1P12-201ENST00000432137 551 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 AC026436.1-201ENST00000510537 270 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF428Q96B54 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF428Q96B54 AL078604.3-201ENST00000615580 211 ntBASIC3.07□□□□□ -1.92
ZNF428Q96B54 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
ZNF428Q96B54 ZNF658B-202ENST00000615961 3375 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 SNORA25.1-201ENST00000362326 128 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 SNORD27-201ENST00000363981 72 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 RNA5SP501-201ENST00000410990 112 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 AC099677.2-201ENST00000436385 175 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 RNA5SP233-201ENST00000459153 113 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 RNU7-116P-201ENST00000516940 62 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 SCARNA24.2-201ENST00000516968 130 ntBASIC3.06□□□□□ -1.92
ZNF428Q96B54 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.06□□□□□ -1.92
ZNF428Q96B54 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
ZNF428Q96B54 MIR21-201ENST00000362134 72 ntBASIC3.05□□□□□ -1.92
ZNF428Q96B54 Y_RNA.257-201ENST00000364596 102 ntBASIC3.05□□□□□ -1.92
ZNF428Q96B54 RNU6-651P-201ENST00000411040 105 ntBASIC3.05□□□□□ -1.92
ZNF428Q96B54 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF428Q96B54 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.05□□□□□ -1.92
ZNF428Q96B54 AC018630.2-201ENST00000534866 2403 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 SNORA63D-201ENST00000364359 132 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 RNU6-117P-201ENST00000365415 107 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 AC009310.1-201ENST00000414414 451 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 SERF1AP1-201ENST00000514575 187 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 Y_RNA.676-201ENST00000516393 96 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 AL512605.2-201ENST00000592972 256 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 AL162424.1-201ENST00000602325 221 ntBASIC3.04□□□□□ -1.92
ZNF428Q96B54 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF428Q96B54 SNORA8-201ENST00000384574 139 ntBASIC3.03□□□□□ -1.92
ZNF428Q96B54 AL603910.2-201ENST00000407268 136 ntBASIC3.03□□□□□ -1.92
ZNF428Q96B54 RNU6-1338P-201ENST00000516328 91 ntBASIC3.03□□□□□ -1.92
ZNF428Q96B54 UBE2WP1-201ENST00000362030 340 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 RNU6-338P-201ENST00000383888 105 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 RNU6-376P-201ENST00000384731 106 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 MTCO1P5-201ENST00000433573 344 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 RPL39P38-201ENST00000467018 153 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 RNU6-1023P-201ENST00000516137 106 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 AC136628.3-201ENST00000521868 290 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 AC084364.2-201ENST00000546924 395 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 MIR5094-201ENST00000578766 85 ntBASIC3.02□□□□□ -1.93
ZNF428Q96B54 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF428Q96B54 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF428Q96B54 AL391987.6-201ENST00000305671 199 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 Y_RNA.277-201ENST00000364754 102 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ZNF428Q96B54 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ZNF428Q96B54 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF428Q96B54 AL162725.1-201ENST00000435405 301 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 RNU6-1337P-201ENST00000516525 95 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 RNU7-28P-201ENST00000516759 62 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 MIR6840-201ENST00000611937 71 ntBASIC3.01□□□□□ -1.93
ZNF428Q96B54 Y_RNA.341-201ENST00000365341 102 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 RNU6-1323P-201ENST00000384025 107 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 MIR17-201ENST00000385012 84 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 MIR548H3-201ENST00000408771 118 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 RNA5SP181-201ENST00000410246 98 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 RNU6-1186P-201ENST00000410429 97 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 RN7SKP223-201ENST00000410582 62 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3□□□□□ -1.93
ZNF428Q96B54 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3□□□□□ -1.93
ZNF428Q96B54 RNU6-341P-201ENST00000516973 96 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 RNU7-128P-201ENST00000517247 62 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 AC005972.2-201ENST00000604690 348 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 ZNF702P-202ENST00000434269 1966 ntBASIC3□□□□□ -1.93
ZNF428Q96B54 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF428Q96B54 Y_RNA.269-201ENST00000364685 89 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 Y_RNA.274-201ENST00000364714 101 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 Y_RNA.478-201ENST00000384358 107 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 SNORA67.3-201ENST00000384366 140 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 RNA5SP467-201ENST00000391274 118 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 RNU6-855P-201ENST00000410395 104 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF428Q96B54 AC244636.1-201ENST00000421152 228 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 RNU6-138P-201ENST00000515952 107 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 RNVU1-2-201ENST00000516326 135 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 SNORA27.4-201ENST00000516650 95 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 AC130289.1-201ENST00000577321 73 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 MIR4287-201ENST00000579398 78 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 MIR4769-201ENST00000584126 77 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 DEFB117-201ENST00000602356 141 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 AL773524.1-201ENST00000614065 229 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 U6.108-201ENST00000637764 58 ntBASIC2.99□□□□□ -1.93
ZNF428Q96B54 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF428Q96B54 Y_RNA.54-201ENST00000362766 105 ntBASIC2.98□□□□□ -1.93
ZNF428Q96B54 Y_RNA.76-201ENST00000362931 109 ntBASIC2.98□□□□□ -1.93
ZNF428Q96B54 RNU6-112P-201ENST00000363599 104 ntBASIC2.98□□□□□ -1.93
ZNF428Q96B54 MIR1289-2-201ENST00000408360 111 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms