Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 HMGN2P34-201ENST00000437647 269 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 AC104332.1-201ENST00000440471 797 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 RPL36AP21-201ENST00000490372 323 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 MIR5692C2-201ENST00000577959 77 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 AL353149.1-201ENST00000610667 244 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 AC134026.1-201ENST00000623249 2239 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 RNU6-653P-201ENST00000363074 106 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 RNU1-22P-201ENST00000363334 158 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 MIR221-201ENST00000385135 110 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 SNORA40.19-201ENST00000390846 128 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 MTCO2P33-201ENST00000402100 465 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 RNU7-141P-201ENST00000459304 62 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 AC097462.1-201ENST00000514125 324 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 RNA5SP24-201ENST00000516478 95 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 MIR4446-201ENST00000578505 67 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 FTX_2.1-201ENST00000618816 94 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 U6.73-201ENST00000619194 103 ntBASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATG4AQ8WYN0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 MIR548I3-201ENST00000408378 149 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 MIR548I1-201ENST00000408810 149 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 HSPE1P21-201ENST00000438283 308 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 RNU7-120P-201ENST00000459334 63 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 RNA5SP281-201ENST00000516504 135 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC100767.1-201ENST00000528178 123 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AP002392.1-201ENST00000537692 208 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC009831.4-201ENST00000620744 325 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 AC068647.2-201ENST00000637380 353 ntBASIC2.28□□□□□ -2.04
ATG4AQ8WYN0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.05
ATG4AQ8WYN0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.05
ATG4AQ8WYN0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU6-923P-201ENST00000364753 107 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU6-47P-201ENST00000383866 107 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 SNORA67.4-201ENST00000384688 142 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU6-417P-201ENST00000384712 107 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNY3P16-201ENST00000516338 101 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU7-115P-201ENST00000516433 55 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU6-63P-201ENST00000516690 95 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 RNU7-172P-201ENST00000517125 64 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 MIR5002-201ENST00000584713 97 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 MIR548AY-201ENST00000617669 107 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 MIR338-201ENST00000636369 67 ntBASIC2.27□□□□□ -2.05
ATG4AQ8WYN0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU4-82P-201ENST00000362443 140 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP493-201ENST00000364115 91 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 U8.7-201ENST00000364940 136 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU4-17P-201ENST00000365598 141 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU6-209P-201ENST00000384118 107 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.555-201ENST00000384673 110 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 MIR29C-201ENST00000385231 88 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU6-493P-201ENST00000391321 108 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AL135786.1-201ENST00000415892 214 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AL162725.1-201ENST00000435405 301 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 RNA5SP137-201ENST00000516833 135 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AC015720.1-201ENST00000565251 277 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 MIR4435-1-201ENST00000582552 80 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AP003357.1-201ENST00000604497 148 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AC005972.2-201ENST00000604690 348 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 AC068700.1-201ENST00000565862 3754 ntBASIC2.26□□□□□ -2.05
ATG4AQ8WYN0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 SNORD115-3-201ENST00000363100 82 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 RNU1-96P-201ENST00000364163 162 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.25□□□□□ -2.05
ATG4AQ8WYN0 RNU6-918P-201ENST00000391219 106 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms