Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MTND4LP32-201ENST00000636111 270 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 MIR410-201ENST00000362222 80 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 SNORA70.7-201ENST00000384159 133 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-424P-201ENST00000384367 105 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-950P-201ENST00000384651 107 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 MIR660-201ENST00000385235 97 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 SNORA75.6-201ENST00000391318 127 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AL034345.1-201ENST00000407768 123 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC096644.2-201ENST00000429278 159 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RPEP5-201ENST00000441137 268 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 CHEK2P4-201ENST00000450340 246 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.635-201ENST00000459041 101 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 TRMT112P2-201ENST00000512910 132 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC074133.1-201ENST00000515696 183 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-917P-201ENST00000516294 104 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RN7SKP88-201ENST00000516847 250 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC005899.2-201ENST00000584353 90 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC005828.6-201ENST00000606610 232 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 7SK.8-201ENST00000612110 250 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 7SK.11-201ENST00000615477 250 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC011476.5-201ENST00000615594 130 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 AC073349.3-201ENST00000617616 186 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 7SK.13-201ENST00000622040 250 ntBASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RTN4IP1Q8WWV3 RNA5SP432-201ENST00000362480 116 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-376P-201ENST00000384731 106 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 SNORD41-201ENST00000386967 70 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 RNA5SP475-201ENST00000410568 110 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-321P-201ENST00000410912 106 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AC138393.2-201ENST00000414742 246 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 Z98949.2-201ENST00000440996 144 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 RPL39P38-201ENST00000467018 153 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AC005840.1-201ENST00000498412 377 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-559P-201ENST00000516151 98 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 SNORA20.3-201ENST00000516880 132 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 MIR3124-201ENST00000582636 67 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AL355073.2-201ENST00000612106 557 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AC004467.1-201ENST00000615678 330 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 AL513423.1-201ENST00000621695 132 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.8□□□□□ -2.28
RTN4IP1Q8WWV3 MIRLET7C-201ENST00000362160 84 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 SNORD115-30-201ENST00000364117 82 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 SNORD116-29-201ENST00000384516 83 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 MIR559-201ENST00000385188 96 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 SNORA69.1-201ENST00000390904 137 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 MIR873-201ENST00000401120 77 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 MTCYBP4-201ENST00000401524 249 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 MTND4P28-201ENST00000426217 387 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNU7-94P-201ENST00000459576 63 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-277P-201ENST00000516272 106 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-341P-201ENST00000516973 96 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AL117336.2-201ENST00000602435 335 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC025253.1-201ENST00000613623 543 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC084781.2-201ENST00000615568 161 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
RTN4IP1Q8WWV3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RNU4-41P-201ENST00000364426 143 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RNU4-76P-201ENST00000364509 141 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 SNORD116-13-201ENST00000384408 92 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 AC098614.3-201ENST00000438957 440 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 AC048334.1-201ENST00000477975 159 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-470P-201ENST00000515954 104 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.78□□□□□ -2.28
RTN4IP1Q8WWV3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms