Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.287-201ENST00000364853 94 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1240P-201ENST00000365155 104 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-793P-201ENST00000384233 104 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNY3P4-201ENST00000384428 101 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 SNORD12B-201ENST00000410433 91 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AC018865.2-201ENST00000423631 129 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU7-169P-201ENST00000459456 61 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1041P-201ENST00000516254 102 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6-699P-201ENST00000517081 110 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 MIR4438-201ENST00000585271 93 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 AC010900.2-201ENST00000604508 210 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.92□□□□□ -2.26
SHROOM3Q8TF72 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 AC100821.1-201ENST00000523153 2479 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.80-201ENST00000362996 102 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNY3P11-201ENST00000364153 102 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNU6-454P-201ENST00000364292 107 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNU6-1145P-201ENST00000384246 107 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNU6-318P-201ENST00000384283 103 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.485-201ENST00000384395 102 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.557-201ENST00000384680 107 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RPL23AP6-201ENST00000446637 472 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 FCF1P4-201ENST00000448326 183 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNA5SP57-201ENST00000459463 123 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 AL163195.1-201ENST00000496941 348 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 AC097473.1-201ENST00000508142 408 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 PRR13P7-201ENST00000605538 430 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 AL365434.2-201ENST00000607979 234 ntBASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.91□□□□□ -2.26
SHROOM3Q8TF72 RNU4-79P-201ENST00000362764 141 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MT-TD-201ENST00000387419 68 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MTCO2P27-201ENST00000420740 428 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MTND4P28-201ENST00000426217 387 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 AC245047.4-201ENST00000433189 144 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 RPL30P15-201ENST00000457129 321 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 Y_RNA.632-201ENST00000459189 102 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 AC091951.2-201ENST00000500762 203 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 RNU6-970P-201ENST00000516312 107 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 RNVU1-2-201ENST00000516326 135 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 RNU6-264P-201ENST00000517134 104 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 AC010999.1-201ENST00000611856 324 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MIR8087-201ENST00000612745 78 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MIR8074-201ENST00000615081 81 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.26
SHROOM3Q8TF72 AC010615.1-201ENST00000594254 1764 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 RNU6-1301P-201ENST00000362724 104 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.187-201ENST00000363918 113 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.419-201ENST00000384041 102 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.482-201ENST00000384377 111 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 MIR329-1-201ENST00000385028 80 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 RNU6-308P-201ENST00000390957 107 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 ELOCP21-201ENST00000412558 336 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC114482.1-201ENST00000418010 247 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC244636.1-201ENST00000421152 228 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 RNU7-94P-201ENST00000459576 63 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC022616.4-201ENST00000522985 181 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC018448.1-201ENST00000552843 316 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC016925.2-201ENST00000605108 242 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AL078604.3-201ENST00000615580 211 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 AC126177.8-201ENST00000618339 1015 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 MIR1302-1-201ENST00000637932 143 ntBASIC0.9□□□□□ -2.27
SHROOM3Q8TF72 RNU6-112P-201ENST00000363599 104 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 RNU6-867P-201ENST00000364956 107 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.364-201ENST00000365532 101 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.471-201ENST00000384312 102 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 RNU6-360P-201ENST00000390944 104 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 SNORD78.2-201ENST00000391076 69 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 COX6CP10-201ENST00000416832 224 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 RAB28P5-201ENST00000427490 651 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 ELOCP24-201ENST00000456370 334 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 SNORD65B-201ENST00000459126 73 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AP000870.1-201ENST00000472927 406 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AC008834.1-201ENST00000511612 175 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AL117351.2-201ENST00000513571 157 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.661-201ENST00000516003 99 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 RNU2-34P-201ENST00000516534 121 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 RNU6-1291P-201ENST00000516591 104 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.691-201ENST00000516611 103 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AC023157.2-201ENST00000540596 141 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AC006380.1-201ENST00000603598 186 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AC104985.2-201ENST00000620598 500 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 MIR8054-201ENST00000620877 86 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 AL008636.1-201ENST00000625038 1018 ntBASIC0.89□□□□□ -2.27
SHROOM3Q8TF72 MIR369-201ENST00000362155 70 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 SNORD115-30-201ENST00000364117 82 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms