Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 Y_RNA.262-201ENST00000364641 102 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 MIR548I3-201ENST00000408378 149 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 MIR548I1-201ENST00000408810 149 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 AC104332.1-201ENST00000440471 797 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 AC245102.2-201ENST00000448956 180 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RNU7-141P-201ENST00000459304 62 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RPS27P22-201ENST00000478056 241 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 AC097462.1-201ENST00000514125 324 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 AL137100.2-201ENST00000555786 315 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 MIR6852-201ENST00000621699 66 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 MIR338-201ENST00000636369 67 ntBASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCHCR1Q8TD31 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 RNU1-96P-201ENST00000364163 162 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 RNU6-1323P-201ENST00000384025 107 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 MIR1253-201ENST00000408273 105 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 RNA5SP137-201ENST00000516833 135 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 AC024405.2-202ENST00000532731 184 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 MIR3169-201ENST00000578032 83 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 MIR4438-201ENST00000585271 93 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 MIR1291-201ENST00000627649 87 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 AC068700.1-201ENST00000565862 3754 ntBASIC2.47□□□□□ -2.01
CCHCR1Q8TD31 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 RNA5SP37-201ENST00000365420 130 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 MTCO2P33-201ENST00000402100 465 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AL117342.1-201ENST00000404861 406 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 Y_RNA.793-201ENST00000411222 111 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 RNU7-120P-201ENST00000459334 63 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AC010409.1-201ENST00000487382 476 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 RNU6-1041P-201ENST00000516254 102 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AC100767.1-201ENST00000528178 123 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AC005972.2-201ENST00000604690 348 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 AC012640.5-201ENST00000623897 319 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 CTSLP2-204ENST00000629029 392 ntBASIC2.46□□□□□ -2.02
CCHCR1Q8TD31 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 AC134026.1-201ENST00000623249 2239 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 MIR518C-201ENST00000384822 101 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNU6-918P-201ENST00000391219 106 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 PIGPP3-201ENST00000425307 415 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 AL162725.1-201ENST00000435405 301 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 ATP5J2P3-201ENST00000451550 258 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNU6-1278P-201ENST00000516130 107 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNY3P16-201ENST00000516338 101 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNU7-115P-201ENST00000516433 55 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 RNU6-63P-201ENST00000516690 95 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 MIR4672-201ENST00000583126 81 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 AP003357.1-201ENST00000604497 148 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 MIR6840-201ENST00000611937 71 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 FTX_2.1-201ENST00000618816 94 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 AC068647.2-201ENST00000637380 353 ntBASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCHCR1Q8TD31 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNU6-1020P-201ENST00000363684 107 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 U8.7-201ENST00000364940 136 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 Y_RNA.308-201ENST00000365043 101 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNU6-47P-201ENST00000383866 107 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 Y_RNA.435-201ENST00000384095 112 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 Y_RNA.500-201ENST00000384466 111 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNU6-417P-201ENST00000384712 107 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 SNORA40.19-201ENST00000390846 128 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNA5SP511-201ENST00000410487 115 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AL135786.1-201ENST00000415892 214 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 EBAG9P1-201ENST00000418955 543 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNU7-172P-201ENST00000517125 64 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 RNU7-128P-201ENST00000517247 62 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AC015720.1-201ENST00000565251 277 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 MIR548AY-201ENST00000617669 107 ntBASIC2.44□□□□□ -2.02
CCHCR1Q8TD31 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
CCHCR1Q8TD31 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
CCHCR1Q8TD31 RNU6-144P-201ENST00000383951 107 ntBASIC2.43□□□□□ -2.02
CCHCR1Q8TD31 Y_RNA.555-201ENST00000384673 110 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms