Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 snoU13.21-201ENST00000459368 105 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 RNU6-1278P-201ENST00000516130 107 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 MIR5696-201ENST00000578474 85 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 MIR4300-201ENST00000581016 96 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 RN7SL793P-201ENST00000583259 296 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 AC104695.3-201ENST00000604052 296 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 AC093424.1-201ENST00000604999 338 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 AC024933.1-201ENST00000608472 348 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 AC127459.3-201ENST00000624328 466 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 U6.115-201ENST00000636045 103 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 AC099654.12-201ENST00000639868 649 ntBASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
ZNF439Q8NDP4 MIR1-1-201ENST00000362147 71 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-222P-201ENST00000362438 107 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1252P-201ENST00000363054 104 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-454P-201ENST00000364292 107 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 MIR15B-201ENST00000385045 98 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-648P-201ENST00000410190 107 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AC015818.7-201ENST00000428754 109 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AC087499.7-201ENST00000441958 109 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 PCMTD1P1-201ENST00000455560 355 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AC092989.1-201ENST00000481235 277 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AC046134.1-201ENST00000514454 666 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AC074133.1-201ENST00000515696 183 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RN7SKP287-201ENST00000516546 266 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-835P-201ENST00000516974 104 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 RNU6-89P-201ENST00000606519 100 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AL591926.4-201ENST00000616895 298 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 AL603755.1-201ENST00000619504 163 ntBASIC0.09□□□□□ -2.4
ZNF439Q8NDP4 MIR18A-201ENST00000362310 71 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 SNORD14.1-201ENST00000365609 90 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC117470.1-201ENST00000381974 330 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 SNORA2B-201ENST00000384583 137 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 MIR517A-201ENST00000385001 87 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC243428.1-201ENST00000421099 264 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 MTND3P23-201ENST00000431980 347 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 RPS3AP17-201ENST00000472594 777 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC083798.1-201ENST00000472671 131 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 SNORA25.10-201ENST00000515926 124 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 RNU7-43P-201ENST00000516554 64 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AC012433.1-201ENST00000588916 398 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 AP001330.5-201ENST00000607176 411 ntBASIC0.08□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 MIR573-201ENST00000384964 99 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 MIR329-1-201ENST00000385028 80 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 MIR136-201ENST00000385207 82 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 SNORD28B-201ENST00000390993 75 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1001P-201ENST00000411265 100 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 SNORD83.1-201ENST00000411362 77 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AL354751.2-201ENST00000415471 210 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC134698.4-201ENST00000523451 826 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC093023.1-201ENST00000547375 507 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 MTND1P24-201ENST00000552175 861 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 MIR4762-201ENST00000585261 75 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC011712.1-201ENST00000588959 234 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC125232.2-201ENST00000592457 143 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AL162730.1-201ENST00000605734 292 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC087752.4-201ENST00000605911 462 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC005828.6-201ENST00000606610 232 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC100812.1-201ENST00000607622 580 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 AC097520.1-201ENST00000624435 385 ntBASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.07□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 U8.5-201ENST00000364528 136 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 RNU6-128P-201ENST00000383976 107 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 RNU4-55P-201ENST00000410731 137 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.615-201ENST00000410769 117 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1068P-201ENST00000410958 103 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 SNRPGP10-201ENST00000432323 225 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 MTND1P4-201ENST00000435196 415 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 SNORD123-201ENST00000459473 70 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 AC073648.5-201ENST00000603502 305 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 AC015726.2-201ENST00000620112 122 ntBASIC0.06□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.231-201ENST00000364358 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms