Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORA26.5-201ENST00000391215 123 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.793-201ENST00000411222 111 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 RNY3P16-201ENST00000516338 101 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 AC004792.1-201ENST00000614523 137 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 AC134026.1-201ENST00000623249 2239 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
CLIP4Q8N3C7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 RNU1-91P-201ENST00000364746 163 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 SRIP3-201ENST00000413200 219 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 EDDM3CP-201ENST00000415977 425 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 PIGPP3-201ENST00000425307 415 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 RNA5SP20-201ENST00000515976 84 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 RNA5SP200-201ENST00000516360 103 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AL078604.3-201ENST00000615580 211 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AL365265.1-201ENST00000621045 234 ntBASIC1.99□□□□□ -2.09
CLIP4Q8N3C7 AC131280.1-202ENST00000624067 4211 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.287-201ENST00000364853 94 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 MTCO2P33-201ENST00000402100 465 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 MIR1253-201ENST00000408273 105 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 MIR1262-201ENST00000408276 93 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 AC060773.1-201ENST00000421698 310 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 HSPE1P13-201ENST00000451143 297 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 RPS27P22-201ENST00000478056 241 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 RNU6-856P-201ENST00000516959 98 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 CBX3P4-201ENST00000538909 354 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 Z83818.1-201ENST00000603584 150 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 AC098479.1-201ENST00000609225 154 ntBASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CLIP4Q8N3C7 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RNU6-923P-201ENST00000364753 107 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 SNORA72.4-201ENST00000384174 132 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 SNORA48.3-201ENST00000391081 134 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AL355497.1-201ENST00000406262 551 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 HSPE1P21-201ENST00000438283 308 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RPS20P10-201ENST00000451209 253 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RPS26P55-201ENST00000471178 356 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 MIR3126-201ENST00000577443 74 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 MIR5692C2-201ENST00000577959 77 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.15-201ENST00000611544 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.16-201ENST00000613119 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.12-201ENST00000613778 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.20-201ENST00000613956 192 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.9-201ENST00000615427 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.11-201ENST00000616345 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.2-201ENST00000616535 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.3-201ENST00000617785 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.19-201ENST00000618602 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 RNU2-1-201ENST00000618664 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.6-201ENST00000619225 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.5-201ENST00000619465 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 U2.10-201ENST00000620268 191 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AC006435.5-201ENST00000624486 112 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 AL159152.1-201ENST00000635019 2587 ntBASIC1.97□□□□□ -2.09
CLIP4Q8N3C7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU4-82P-201ENST00000362443 140 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU6-1020P-201ENST00000363684 107 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU6-47P-201ENST00000383866 107 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 SNORD116-13-201ENST00000384408 92 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 OOSP1P1-201ENST00000423265 274 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU6-63P-201ENST00000516690 95 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 AP002392.1-201ENST00000537692 208 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 AL031274.2-201ENST00000599419 203 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 AC013791.1-201ENST00000616619 62 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.1
CLIP4Q8N3C7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms