Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 Y_RNA.14-201ENST00000362415 103 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 RNU1-96P-201ENST00000364163 162 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.562-201ENST00000384695 113 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AL135790.2-201ENST00000437701 267 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 MTND1P19-201ENST00000511780 315 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 SNORA70.12-201ENST00000516084 153 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AL137100.2-201ENST00000555786 315 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 MIR4438-201ENST00000585271 93 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 MIR6852-201ENST00000621699 66 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AC064859.1-201ENST00000624741 174 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
ZC3HC1Q86WB0 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 RNU1-22P-201ENST00000363334 158 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 CST2P1-201ENST00000425770 87 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 AC091959.1-201ENST00000495857 238 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 AP000942.4-201ENST00000604811 241 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ZC3HC1Q86WB0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 SNORA25.1-201ENST00000362326 128 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-117P-201ENST00000365415 107 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 MIR634-201ENST00000385208 97 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 HSPE1P13-201ENST00000451143 297 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC097462.1-201ENST00000514125 324 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.680-201ENST00000516441 93 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-63P-201ENST00000516690 95 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC037487.3-201ENST00000606668 112 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.88□□□□□ -2.11
ZC3HC1Q86WB0 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNA5SP276-201ENST00000362580 94 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.307-201ENST00000365022 117 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.350-201ENST00000365409 98 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.401-201ENST00000383965 117 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-710P-201ENST00000410424 105 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 EBAG9P1-201ENST00000418955 543 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 MTND4LP30-201ENST00000454092 297 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RPL39P38-201ENST00000467018 153 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 AC010409.1-201ENST00000487382 476 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 SNORA27.4-201ENST00000516650 95 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNU7-172P-201ENST00000517125 64 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-801P-201ENST00000364087 105 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.447-201ENST00000384184 113 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-514P-201ENST00000384208 107 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 SNORD116-13-201ENST00000384408 92 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 AL603910.2-201ENST00000407268 136 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-855P-201ENST00000410395 104 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 AL512605.2-201ENST00000592972 256 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 U2.14-201ENST00000615943 113 ntBASIC1.86□□□□□ -2.11
ZC3HC1Q86WB0 UBE2WP1-201ENST00000362030 340 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.44-201ENST00000362676 108 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 Y_RNA.352-201ENST00000365439 102 ntBASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.85□□□□□ -2.11
ZC3HC1Q86WB0 RNU6-662P-201ENST00000384253 104 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms