Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
H3F3CQ6NXT2 AL117336.2-201ENST00000602435 335 ntBASIC0.73□□□□□ -2.29
H3F3CQ6NXT2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 RNU6-700P-201ENST00000391043 107 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 MIR548F5-201ENST00000408421 86 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 Y_RNA.594-201ENST00000410373 140 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 EIF1P2-201ENST00000428233 350 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 PCNPP5-201ENST00000452246 481 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 SNORD5.1-201ENST00000458800 75 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 RPL7P42-201ENST00000481005 679 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 MTND5P5-201ENST00000503764 376 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AC026782.1-201ENST00000512952 449 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 Y_RNA.670-201ENST00000516255 105 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AC068137.4-201ENST00000638485 296 ntBASIC0.72□□□□□ -2.29
H3F3CQ6NXT2 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 SNORA27.1-201ENST00000362604 124 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RNY1P16-201ENST00000363063 111 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 Y_RNA.157-201ENST00000363638 102 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 SNORA80D-201ENST00000384488 135 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 MTCYBP4-201ENST00000401524 249 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RNU6-1050P-201ENST00000410388 107 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RPL23AP50-201ENST00000434149 455 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RPS3AP52-201ENST00000435639 297 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RPL39P39-201ENST00000455840 151 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AL049830.1-201ENST00000468034 425 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 RNU6-720P-201ENST00000516363 108 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AP002001.1-203ENST00000534002 267 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC090049.2-201ENST00000550377 109 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC018448.1-201ENST00000552843 316 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC018462.2-201ENST00000605375 395 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC104260.1-201ENST00000616660 539 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC006435.5-201ENST00000624486 112 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 MIR3688-2-201ENST00000636963 87 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 AC068700.1-201ENST00000565862 3754 ntBASIC0.71□□□□□ -2.3
H3F3CQ6NXT2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 Y_RNA.364-201ENST00000365532 101 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 RNU6-1145P-201ENST00000384246 107 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 Y_RNA.490-201ENST00000384413 102 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 RNA5SP475-201ENST00000410568 110 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC074085.1-201ENST00000413598 418 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 PIGPP3-201ENST00000425307 415 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 RNU6-625P-201ENST00000459412 107 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC022493.2-201ENST00000506122 481 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 RNU6-341P-201ENST00000516973 96 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC091178.2-201ENST00000584401 117 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC009229.3-201ENST00000608056 282 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MIR1244-1-201ENST00000612829 85 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC127459.3-201ENST00000624328 466 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MIR1244-3-201ENST00000635744 85 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 U6.115-201ENST00000636045 103 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MIR1244-2-201ENST00000636449 85 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MIR1244-4-202ENST00000636813 85 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 AC023934.1-201ENST00000574529 2389 ntBASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
H3F3CQ6NXT2 RNU6-454P-201ENST00000364292 107 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 RNU4-41P-201ENST00000364426 143 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 RNU6-1215P-201ENST00000384441 102 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR653-201ENST00000385279 96 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 Z98949.2-201ENST00000440996 144 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 RNU6-329P-201ENST00000459618 107 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 AP002004.2-201ENST00000531656 154 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR5701-3-201ENST00000578890 82 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR5701-1-201ENST00000585138 82 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 AL357312.1-201ENST00000603879 298 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR5701-2-201ENST00000615634 82 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR6515-201ENST00000619843 57 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
H3F3CQ6NXT2 AL442644.1-201ENST00000454390 3105 ntBASIC0.68□□□□□ -2.3
H3F3CQ6NXT2 RNU6-623P-201ENST00000363143 105 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms