Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL137792.2-201ENST00000443484 235 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 AC091021.1-201ENST00000468051 388 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.02□□□□□ -2.25
ATL3Q6DD88 AC022868.1-201ENST00000517767 391 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 MTND4LP26-201ENST00000518144 282 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
ATL3Q6DD88 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
ATL3Q6DD88 MIRLET7C-201ENST00000362160 84 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 SNORD114-7-201ENST00000362520 77 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 Y_RNA.361-201ENST00000365515 120 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 MIR7-2-201ENST00000384970 110 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 Y_RNA.599-201ENST00000410489 109 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 RNU6-1054P-201ENST00000411293 104 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 RAB28P5-201ENST00000427490 651 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.01□□□□□ -2.25
ATL3Q6DD88 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 SNORA40.9-201ENST00000515895 93 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 RNU6-1213P-201ENST00000517075 94 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 SNORA28-201ENST00000606769 126 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC092794.1-201ENST00000612734 582 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC087588.2-201ENST00000617667 426 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 MIR3674-201ENST00000636576 68 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AC068647.2-201ENST00000637380 353 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
ATL3Q6DD88 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
ATL3Q6DD88 CASC19-280ENST00000642102 1351 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 RNU6-99P-201ENST00000364721 107 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 MT-TL1-201ENST00000386347 75 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 STAG3L5P-204ENST00000443759 179 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 RPS4XP11-201ENST00000446897 772 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
ATL3Q6DD88 RNU6-120P-201ENST00000516077 103 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 RNU6-351P-201ENST00000516097 100 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 RNU7-28P-201ENST00000516759 62 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 RPL21P9-201ENST00000556149 474 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 AC022306.2-201ENST00000617563 647 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 AC106754.2-201ENST00000623006 233 ntBASIC1□□□□□ -2.25
ATL3Q6DD88 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.99□□□□□ -2.25
ATL3Q6DD88 SNORA1B-201ENST00000362535 133 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNU4-76P-201ENST00000364509 141 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.99□□□□□ -2.25
ATL3Q6DD88 SNORD41-201ENST00000386967 70 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR1276-201ENST00000408707 83 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNA5SP475-201ENST00000410568 110 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 AC092423.1-201ENST00000430165 186 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNU6-625P-201ENST00000459412 107 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR2355-201ENST00000517199 87 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR4778-201ENST00000577635 80 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 GHRLOS.1-201ENST00000610995 70 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR1244-1-201ENST00000612829 85 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 PISRT1.1-201ENST00000616930 107 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 AC127459.3-201ENST00000624328 466 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR1244-3-201ENST00000635744 85 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR1244-2-201ENST00000636449 85 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 MIR1244-4-202ENST00000636813 85 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 AC005592.1-201ENST00000566527 1640 ntBASIC0.99□□□□□ -2.25
ATL3Q6DD88 RNU6-199P-201ENST00000362954 107 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 Y_RNA.124-201ENST00000363339 93 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 Y_RNA.248-201ENST00000364501 109 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 SNORD81.2-201ENST00000365153 76 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 RNU6-407P-201ENST00000365280 104 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 MIR562-201ENST00000384894 95 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 MIR873-201ENST00000401120 77 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 SNORD12B-201ENST00000410433 91 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.98□□□□□ -2.25
ATL3Q6DD88 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.98□□□□□ -2.25
ATL3Q6DD88 SNORA31.4-201ENST00000516049 129 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 RNU6-917P-201ENST00000516294 104 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.98□□□□□ -2.25
ATL3Q6DD88 AL358944.1-201ENST00000528537 144 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 AC090049.2-201ENST00000550377 109 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 AC080078.3-201ENST00000605407 463 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 AC098679.4-201ENST00000624241 654 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 AL669831.3-213ENST00000636676 183 ntBASIC0.98□□□□□ -2.25
ATL3Q6DD88 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
ATL3Q6DD88 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.160-201ENST00000363677 92 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 RNY1-201ENST00000364228 113 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.265-201ENST00000364677 108 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.267-201ENST00000364679 109 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.505-201ENST00000384489 102 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 Y_RNA.577-201ENST00000384794 101 ntBASIC0.97□□□□□ -2.25
ATL3Q6DD88 SNORD12-201ENST00000391002 90 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms