Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF43Q68DV7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF43Q68DV7 MIR449A-201ENST00000362113 91 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 Y_RNA.66-201ENST00000362862 102 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 SNORA63.5-201ENST00000363548 123 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF43Q68DV7 RNY1P7-201ENST00000384743 110 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 MIR562-201ENST00000384894 95 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 MIR300-201ENST00000401138 83 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 RNA5SP136-201ENST00000410906 107 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF43Q68DV7 AL033523.1-201ENST00000605153 153 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 AC013412.1-201ENST00000610687 192 ntBASIC3.32□□□□□ -1.88
RNF43Q68DV7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF43Q68DV7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF43Q68DV7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF43Q68DV7 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 RNU6-1138P-201ENST00000365359 106 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 SNORA1-201ENST00000384107 130 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 RNU6-975P-201ENST00000384296 105 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 RNA5SP354-201ENST00000391247 136 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF43Q68DV7 OR9P1P-201ENST00000496431 281 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 ATP5EP1-201ENST00000510257 156 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 RNU6-94P-201ENST00000607728 107 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF43Q68DV7 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 AC010680.1-201ENST00000590024 3590 ntBASIC3.31□□□□□ -1.88
RNF43Q68DV7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF43Q68DV7 RNU6-1113P-201ENST00000384348 107 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 Y_RNA.544-201ENST00000384650 113 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 AP000567.1-201ENST00000406413 156 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 RPS4XP11-201ENST00000446897 772 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 RPL36AP48-201ENST00000485521 314 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 RNU6-109P-201ENST00000516364 107 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 RNU6-184P-201ENST00000516514 107 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 AC079598.5-201ENST00000547460 117 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 MIR4662B-201ENST00000579498 81 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 AL442128.1-201ENST00000615151 90 ntBASIC3.3□□□□□ -1.88
RNF43Q68DV7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF43Q68DV7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF43Q68DV7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF43Q68DV7 RNA5SP432-201ENST00000362480 116 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 Y_RNA.49-201ENST00000362714 112 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 Y_RNA.323-201ENST00000365157 109 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 Y_RNA.366-201ENST00000365540 102 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 RNU6-750P-201ENST00000390946 107 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 AC007064.1-201ENST00000412238 351 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 UQCRHP3-201ENST00000451503 251 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 RPS27P22-201ENST00000478056 241 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 COX6CP6-201ENST00000490840 228 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 MIR3117-201ENST00000584034 78 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 AL137067.1-201ENST00000615933 120 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
RNF43Q68DV7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF43Q68DV7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF43Q68DV7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF43Q68DV7 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 AC096725.1-201ENST00000514266 313 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 RN7SKP12-201ENST00000516275 143 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 RNU6-126P-201ENST00000516685 103 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF43Q68DV7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF43Q68DV7 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
RNF43Q68DV7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF43Q68DV7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF43Q68DV7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF43Q68DV7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RNF43Q68DV7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF43Q68DV7 AL589743.1-201ENST00000551932 2712 ntBASIC3.28□□□□□ -1.89
RNF43Q68DV7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF43Q68DV7 MIR590-201ENST00000385008 97 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RN7SKP123-201ENST00000410732 291 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RNU6-592P-201ENST00000411333 103 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RPS3AP1-201ENST00000413190 320 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RPL30P4-201ENST00000429309 333 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF43Q68DV7 AC010099.1-201ENST00000455434 375 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RNA5SP385-201ENST00000515947 110 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RNU6-504P-201ENST00000516568 104 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 RNU6-113P-201ENST00000516653 101 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 AC011604.1-201ENST00000545978 196 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 AC008739.2-201ENST00000597006 317 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 uc_338.25-201ENST00000613756 156 ntBASIC3.27□□□□□ -1.89
RNF43Q68DV7 AC006435.5-201ENST00000624486 112 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms