Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RNU6-63P-201ENST00000516690 95 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 AL358944.1-201ENST00000528537 144 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.64□□□□□ -2.15
ALFQ53S48 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.64□□□□□ -2.15
ALFQ53S48 CYP3A52P-201ENST00000563326 91 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 MIR4778-201ENST00000577635 80 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 AL138825.1-201ENST00000618587 192 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 AC106754.2-201ENST00000623006 233 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 U6.92-201ENST00000636464 89 ntBASIC1.64□□□□□ -2.15
ALFQ53S48 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ALFQ53S48 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
ALFQ53S48 Y_RNA.101-201ENST00000363154 102 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU6-324P-201ENST00000363957 106 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU6-457P-201ENST00000363999 107 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 Y_RNA.361-201ENST00000365515 120 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ALFQ53S48 AL031003.1-201ENST00000404229 172 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU5A-5P-201ENST00000411054 116 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 CALM2P4-201ENST00000430810 426 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 AL049830.1-201ENST00000468034 425 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 AC092991.1-201ENST00000477176 376 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 AL163540.1-201ENST00000485382 386 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 Y_RNA.661-201ENST00000516003 99 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU6-155P-201ENST00000516347 100 ntBASIC1.63□□□□□ -2.15
ALFQ53S48 RNU6-199P-201ENST00000362954 107 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 Y_RNA.230-201ENST00000364348 109 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 SDAD1P3-201ENST00000427380 333 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 RNU6-1337P-201ENST00000516525 95 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 AC093027.1-201ENST00000546698 429 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 MIR4303-201ENST00000581299 66 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 MIR4272-201ENST00000635924 64 ntBASIC1.62□□□□□ -2.15
ALFQ53S48 RNU6-1115P-201ENST00000362490 106 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 Y_RNA.39-201ENST00000362620 98 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 RNU4-13P-201ENST00000364019 141 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 RNU6-708P-201ENST00000384217 107 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 RNU6-482P-201ENST00000391068 107 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 U8.16-201ENST00000391279 133 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.61□□□□□ -2.15
ALFQ53S48 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.61□□□□□ -2.15
ALFQ53S48 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 Y_RNA.804-201ENST00000615262 101 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 AC112487.2-201ENST00000637950 304 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 AC005592.1-201ENST00000566527 1640 ntBASIC1.61□□□□□ -2.15
ALFQ53S48 ZNF72P-201ENST00000425869 1908 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 RNA5SP432-201ENST00000362480 116 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 Y_RNA.446-201ENST00000384178 104 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 CHEK2P4-201ENST00000450340 246 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
ALFQ53S48 AC092447.9-201ENST00000603395 144 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 AL513534.2-201ENST00000603836 250 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
ALFQ53S48 RNY3P14-201ENST00000384309 102 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 MT-TD-201ENST00000387419 68 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 RNA5SP511-201ENST00000410487 115 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 Y_RNA.621-201ENST00000411065 96 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 AL354751.2-201ENST00000415471 210 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 AL162725.1-201ENST00000435405 301 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 MTND3P22-201ENST00000510932 243 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 RNU6-322P-201ENST00000516010 103 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 RNU6-976P-201ENST00000516086 111 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 RNU6-922P-201ENST00000516753 99 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
ALFQ53S48 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
ALFQ53S48 Y_RNA.58-201ENST00000362807 102 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 Y_RNA.154-201ENST00000363624 102 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 RNU1-42P-201ENST00000364033 160 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 RNY3P1-201ENST00000365085 102 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 RNY3-201ENST00000365484 102 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.58□□□□□ -2.16
ALFQ53S48 RNU6-237P-201ENST00000515985 71 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 AC019288.1-201ENST00000557918 224 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 RPS29P30-201ENST00000600975 111 ntBASIC1.58□□□□□ -2.16
ALFQ53S48 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ALFQ53S48 RNU6-60P-201ENST00000364792 103 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 RN7SKP295-201ENST00000517264 153 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.57□□□□□ -2.16
ALFQ53S48 Y_RNA.772-201ENST00000606692 102 ntBASIC1.57□□□□□ -2.16
ALFQ53S48 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
ALFQ53S48 Y_RNA.252-201ENST00000364556 101 ntBASIC1.56□□□□□ -2.16
ALFQ53S48 RNU1-115P-201ENST00000365329 160 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms