Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC112771.1-201ENST00000463581 102 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 HMGN2P9-201ENST00000476875 229 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 SNORA70.12-201ENST00000516084 153 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 Y_RNA.712-201ENST00000517011 92 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 AC127455.1-201ENST00000565496 145 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 MIR6129-201ENST00000616087 109 ntBASIC2.75□□□□□ -1.97
USP39Q53GS9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.75□□□□□ -1.97
USP39Q53GS9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.75□□□□□ -1.97
USP39Q53GS9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
USP39Q53GS9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP39Q53GS9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 SNORD32B-201ENST00000364460 84 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 RNY3P5-201ENST00000384127 102 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 MIR147B-201ENST00000390185 80 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 SNORA75.5-201ENST00000391291 81 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 HSPE1P21-201ENST00000438283 308 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
USP39Q53GS9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
USP39Q53GS9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.74□□□□□ -1.97
USP39Q53GS9 SNRPGP8-201ENST00000454064 226 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 AL441985.1-201ENST00000457727 251 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 CYCSP26-201ENST00000534107 320 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.74□□□□□ -1.97
USP39Q53GS9 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
USP39Q53GS9 AC064859.1-201ENST00000624741 174 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 AC068647.2-201ENST00000637380 353 ntBASIC2.74□□□□□ -1.97
USP39Q53GS9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
USP39Q53GS9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
USP39Q53GS9 SNORD45.3-201ENST00000363836 72 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 RNU6-597P-201ENST00000365620 102 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 RNU6-476P-201ENST00000384726 107 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AL512604.1-201ENST00000404812 257 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AL158823.1-201ENST00000418441 478 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AL445687.1-201ENST00000439946 251 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 UBL5P3-201ENST00000475112 231 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 RNA5SP24-201ENST00000516478 95 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AC079598.5-201ENST00000547460 117 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 SNORD53-201ENST00000579969 78 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
USP39Q53GS9 AL031274.2-201ENST00000599419 203 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AC120024.3-201ENST00000603167 156 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AP003357.1-201ENST00000604497 148 ntBASIC2.73□□□□□ -1.97
USP39Q53GS9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
USP39Q53GS9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
USP39Q53GS9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
USP39Q53GS9 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 AL159152.1-201ENST00000635019 2587 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP39Q53GS9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP39Q53GS9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 SNORA20B-201ENST00000384220 132 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 RNU6-1144P-201ENST00000384247 104 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 MIR873-201ENST00000401120 77 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 RN7SKP179-201ENST00000516126 217 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 AC090049.2-201ENST00000550377 109 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USP39Q53GS9 MIR3117-201ENST00000584034 78 ntBASIC2.72□□□□□ -1.97
USP39Q53GS9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.72□□□□□ -1.97
USP39Q53GS9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP39Q53GS9 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 RNU1-41P-201ENST00000516161 162 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 RNU1-48P-201ENST00000516400 162 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 Y_RNA.709-201ENST00000516952 92 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 RPL17P51-201ENST00000605218 238 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.71□□□□□ -1.98
USP39Q53GS9 AL021707.8-201ENST00000609428 183 ntBASIC2.71□□□□□ -1.98
USP39Q53GS9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.98
USP39Q53GS9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP39Q53GS9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP39Q53GS9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
USP39Q53GS9 SNORA27.1-201ENST00000362604 124 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 U8.2-201ENST00000363156 134 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 RNU6-978P-201ENST00000364371 103 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 SNORA25.7-201ENST00000364375 127 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 RNU6-755P-201ENST00000364400 103 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 MIR518C-201ENST00000384822 101 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 RN7SKP101-201ENST00000411376 320 ntBASIC2.7□□□□□ -1.98
USP39Q53GS9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms