Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 SNORA64-201ENST00000384674 134 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AL357134.1-201ENST00000445848 426 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.47□□□□□ -2.01
LONRF3Q496Y0 RNU1-131P-201ENST00000458943 161 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 RNU6-191P-201ENST00000516295 94 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 SNORA27.4-201ENST00000516650 95 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AC025647.1-201ENST00000517879 253 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AC087441.2-201ENST00000529141 262 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.47□□□□□ -2.01
LONRF3Q496Y0 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 MIR4643-201ENST00000577473 78 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
LONRF3Q496Y0 MIR3684-201ENST00000579779 74 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AL512605.2-201ENST00000592972 256 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
LONRF3Q496Y0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LONRF3Q496Y0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.65-201ENST00000362846 100 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 RNU6-338P-201ENST00000383888 105 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 AL023284.1-201ENST00000403956 276 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 AL355796.1-201ENST00000406706 323 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 RN7SKP192-201ENST00000411291 327 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 AC090255.1-201ENST00000495779 349 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LONRF3Q496Y0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.46□□□□□ -2.02
LONRF3Q496Y0 AC141273.2-201ENST00000618989 130 ntBASIC2.46□□□□□ -2.02
LONRF3Q496Y0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LONRF3Q496Y0 UBE2WP1-201ENST00000362030 340 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 SNORA20B-201ENST00000384220 132 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 SNORD58.1-201ENST00000391313 66 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 AC016909.1-201ENST00000415916 166 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 SUMO1P2-201ENST00000452524 304 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 SNORD65B-201ENST00000459126 73 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 AC005786.1-201ENST00000588553 154 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.45□□□□□ -2.02
LONRF3Q496Y0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LONRF3Q496Y0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 RNU6-662P-201ENST00000384253 104 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 AC024067.1-201ENST00000426199 223 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.44□□□□□ -2.02
LONRF3Q496Y0 AC010598.1-201ENST00000510378 103 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 RNU6-856P-201ENST00000516959 98 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.44□□□□□ -2.02
LONRF3Q496Y0 AL162424.1-201ENST00000602325 221 ntBASIC2.44□□□□□ -2.02
LONRF3Q496Y0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.117-201ENST00000363294 101 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNA5SP489-201ENST00000410986 109 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNU6-651P-201ENST00000411040 105 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNU2-61P-201ENST00000411069 191 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 RNVU1-2-201ENST00000516326 135 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 AC027419.1-201ENST00000522976 328 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 MIR3668-201ENST00000582138 75 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 MIR4713-201ENST00000582691 75 ntBASIC2.43□□□□□ -2.02
LONRF3Q496Y0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.43□□□□□ -2.02
LONRF3Q496Y0 SNORA27.1-201ENST00000362604 124 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.515-201ENST00000384535 112 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 MIR873-201ENST00000401120 77 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU2-14P-201ENST00000411053 191 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.42□□□□□ -2.02
LONRF3Q496Y0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 SNORA70.12-201ENST00000516084 153 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 RNU4-71P-201ENST00000516258 113 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 MIR5094-201ENST00000578766 85 ntBASIC2.42□□□□□ -2.02
LONRF3Q496Y0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
LONRF3Q496Y0 MIR504-201ENST00000385065 83 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 RNU6-907P-201ENST00000390924 102 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 RNU6-710P-201ENST00000410424 105 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.41□□□□□ -2.02
LONRF3Q496Y0 AC060773.1-201ENST00000421698 310 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 AL135790.2-201ENST00000437701 267 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 RPL23AP7-203ENST00000449021 469 ntBASIC2.41□□□□□ -2.02
LONRF3Q496Y0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.41□□□□□ -2.02
LONRF3Q496Y0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LONRF3Q496Y0 SNORD114-7-201ENST00000362520 77 ntBASIC2.4□□□□□ -2.03
LONRF3Q496Y0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms