Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 snoZ196.1-201ENST00000625269 89 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 SNORA25.1-201ENST00000362326 128 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 RNU1-58P-201ENST00000362413 163 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 RNU4-80P-201ENST00000363200 141 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 RNY1-201ENST00000364228 113 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 RNU6-740P-201ENST00000364734 105 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 SNORA8-201ENST00000384574 139 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AL031003.1-201ENST00000404229 172 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC123900.1-201ENST00000420390 96 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC010531.2-201ENST00000465012 153 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC091959.1-201ENST00000495857 238 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 MIR3145-201ENST00000580727 82 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 MIR3668-201ENST00000582138 75 ntBASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.68□□□□□ -2.14
SNAI3Q3KNW1 MIR340-201ENST00000362125 95 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 RNU6-514P-201ENST00000384208 107 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 RNU6-57P-201ENST00000411348 103 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 RNU6-498P-201ENST00000459468 107 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 AC025647.1-201ENST00000517879 253 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 MIR3935-201ENST00000583472 104 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 MIR4282-201ENST00000583613 67 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 AC245060.5-201ENST00000610778 3293 ntBASIC1.67□□□□□ -2.14
SNAI3Q3KNW1 SNORD114-7-201ENST00000362520 77 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.65-201ENST00000362846 100 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.76-201ENST00000362931 109 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNU6-324P-201ENST00000363957 106 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 MIR23A-201ENST00000385245 73 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AL355796.1-201ENST00000406706 323 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNU6-651P-201ENST00000411040 105 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNU2-61P-201ENST00000411069 191 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RN7SKP192-201ENST00000411291 327 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AL357134.1-201ENST00000445848 426 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 SUMO1P2-201ENST00000452524 304 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 SNORD65B-201ENST00000459126 73 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 RNU4-71P-201ENST00000516258 113 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AC087441.2-201ENST00000529141 262 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AL512605.2-201ENST00000592972 256 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AC009779.6-201ENST00000603972 165 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 AL159152.1-201ENST00000635019 2587 ntBASIC1.66□□□□□ -2.14
SNAI3Q3KNW1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
SNAI3Q3KNW1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SNAI3Q3KNW1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RNU6-23P-201ENST00000363283 107 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.117-201ENST00000363294 101 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 SNORA20B-201ENST00000384220 132 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RNU6-662P-201ENST00000384253 104 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RNU6-1289P-201ENST00000384431 106 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RNA5SP212-201ENST00000391223 107 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 AC016909.1-201ENST00000415916 166 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 AC010598.1-201ENST00000510378 103 ntBASIC1.65□□□□□ -2.15
SNAI3Q3KNW1 RPL23AP94-201ENST00000512518 302 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms