Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 MTND1P11-201ENST00000456661 876 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 AC046134.1-201ENST00000514454 666 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 MIR3684-201ENST00000579779 74 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 MIR4764-201ENST00000580680 88 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 AC024933.1-201ENST00000608472 348 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 AC091925.1-201ENST00000623204 462 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-222P-201ENST00000362438 107 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 RNA5SP48-201ENST00000363969 126 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-654P-201ENST00000364373 107 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 SNORD14.1-201ENST00000365609 90 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-281P-201ENST00000384212 103 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 RNU4-55P-201ENST00000410731 137 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AL590632.1-201ENST00000424289 371 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 PCNPP5-201ENST00000452246 481 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 RNU11-2P-201ENST00000516898 142 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AC087752.4-201ENST00000605911 462 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 AC097520.1-201ENST00000624435 385 ntBASIC0.16□□□□□ -2.38
TBC1D28Q2M2D7 MIR1-1-201ENST00000362147 71 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-1264P-201ENST00000383891 107 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 SNORA75-201ENST00000384158 137 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 MIR517A-201ENST00000385001 87 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 MIR136-201ENST00000385207 82 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 AC243428.1-201ENST00000421099 264 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 AL392103.1-201ENST00000447000 198 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 ACA59.1-201ENST00000515966 143 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 SNORA18.7-201ENST00000516910 131 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 MIR5696-201ENST00000578474 85 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 AC008133.2-201ENST00000624540 351 ntBASIC0.15□□□□□ -2.39
TBC1D28Q2M2D7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.231-201ENST00000364358 102 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.372-201ENST00000365599 102 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.409-201ENST00000383990 98 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 MIR1302-7-201ENST00000408841 72 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-648P-201ENST00000410190 107 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU7-175P-201ENST00000515915 61 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-63P-201ENST00000516690 95 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-835P-201ENST00000516974 104 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-89P-201ENST00000606519 100 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 AL138726.1-201ENST00000614873 333 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 AL591926.4-201ENST00000616895 298 ntBASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.14□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-1252P-201ENST00000363054 104 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-1322P-201ENST00000364309 107 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.405-201ENST00000383979 100 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.451-201ENST00000384200 100 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.524-201ENST00000384564 100 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 SNORA2B-201ENST00000384583 137 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.561-201ENST00000384694 100 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 MIR873-201ENST00000401120 77 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 RNA5SP95-201ENST00000410319 137 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 ELOCP21-201ENST00000412558 336 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 MTND3P23-201ENST00000431980 347 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 RNU7-43P-201ENST00000516554 64 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 AC093027.1-201ENST00000546698 429 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 AC093023.1-201ENST00000547375 507 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 AC104695.3-201ENST00000604052 296 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 U6.115-201ENST00000636045 103 ntBASIC0.13□□□□□ -2.39
TBC1D28Q2M2D7 MIR103A1-201ENST00000362165 78 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 U8.5-201ENST00000364528 136 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AC117470.1-201ENST00000381974 330 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 MIR573-201ENST00000384964 99 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AL390729.2-201ENST00000416137 156 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AC005534.2-201ENST00000431047 433 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 MTATP6P13-201ENST00000438531 667 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 RN7SKP298-201ENST00000515950 94 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-1114P-201ENST00000516022 107 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 MIR4762-201ENST00000585261 75 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AC019193.3-201ENST00000609144 554 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 AC073114.1-201ENST00000612027 490 ntBASIC0.12□□□□□ -2.39
TBC1D28Q2M2D7 MIR330-201ENST00000362196 94 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 RNU4-67P-201ENST00000364569 141 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.533-201ENST00000384596 114 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 MIR1197-201ENST00000408818 88 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 Y_RNA.621-201ENST00000411065 96 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 RNU6-1001P-201ENST00000411265 100 ntBASIC0.11□□□□□ -2.39
TBC1D28Q2M2D7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms