Protein–RNA interactions for Protein: Q16560

SNRNP35, U11/U12 small nuclear ribonucleoprotein 35 kDa protein, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35Q16560 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 RNU6-1050P-201ENST00000410388 107 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC074085.1-201ENST00000413598 418 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AL139396.1-201ENST00000421137 167 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.83□□□□□ -2.28
SNRNP35Q16560 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 RNU6-917P-201ENST00000516294 104 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 Y_RNA.691-201ENST00000516611 103 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 RN7SKP88-201ENST00000516847 250 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC023157.2-201ENST00000540596 141 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC090049.2-201ENST00000550377 109 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AC060780.3-201ENST00000589464 80 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 7SK.8-201ENST00000612110 250 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 7SK.11-201ENST00000615477 250 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 7SK.13-201ENST00000622040 250 ntBASIC0.83□□□□□ -2.28
SNRNP35Q16560 RNA5SP361-201ENST00000362686 118 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RNU6-1266P-201ENST00000362794 105 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 Y_RNA.72-201ENST00000362894 103 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 Y_RNA.86-201ENST00000363020 111 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 Y_RNA.473-201ENST00000384333 102 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RNY1P4-201ENST00000384595 115 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SNRNP35Q16560 MTCYBP4-201ENST00000401524 249 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 MTCYBP10-201ENST00000424905 650 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RPS3AP52-201ENST00000435639 297 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 PCNPP5-201ENST00000452246 481 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 AL049830.1-201ENST00000468034 425 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RNU6-273P-201ENST00000516937 96 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 AC018448.1-201ENST00000552843 316 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 AC012557.2-201ENST00000605919 418 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 GHRLOS.1-201ENST00000610995 70 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
SNRNP35Q16560 AC073869.6-201ENST00000640656 341 ntBASIC0.82□□□□□ -2.28
SNRNP35Q16560 Y_RNA.88-201ENST00000363029 99 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 Y_RNA.166-201ENST00000363730 102 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 Y_RNA.279-201ENST00000364763 95 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 Y_RNA.393-201ENST00000383936 102 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 U8.16-201ENST00000391279 133 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.81□□□□□ -2.28
SNRNP35Q16560 MTND1P4-201ENST00000435196 415 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 Z98949.2-201ENST00000440996 144 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 snoU13.25-201ENST00000458945 104 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 RPS27P22-201ENST00000478056 241 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 RNA5SP20-201ENST00000515976 84 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.81□□□□□ -2.28
SNRNP35Q16560 SNORA28-201ENST00000606769 126 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 AC104260.1-201ENST00000616660 539 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
SNRNP35Q16560 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SNRNP35Q16560 SNORA1B-201ENST00000362535 133 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 MIR548F5-201ENST00000408421 86 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AC018865.2-201ENST00000423631 129 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 CALM2P4-201ENST00000430810 426 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AC245047.7-201ENST00000440265 293 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 SUMO1P2-201ENST00000452524 304 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AC092989.1-201ENST00000481235 277 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AC018710.1-201ENST00000506509 158 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 Y_RNA.708-201ENST00000516950 96 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 RNU2-12P-201ENST00000517216 168 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 PRELID3BP2-201ENST00000605362 201 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AL021879.1-201ENST00000611756 288 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 SNORD3E-202ENST00000627253 216 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 AC068647.2-201ENST00000637380 353 ntBASIC0.8□□□□□ -2.28
SNRNP35Q16560 RNU6-199P-201ENST00000362954 107 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 RNU4-76P-201ENST00000364509 141 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SNRNP35Q16560 MIR873-201ENST00000401120 77 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.79□□□□□ -2.28
SNRNP35Q16560 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.79□□□□□ -2.28
SNRNP35Q16560 MTND3P10-201ENST00000450967 341 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 RNU6-718P-201ENST00000516166 105 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 MIR2355-201ENST00000517199 87 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AP003716.2-201ENST00000528260 108 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AP002004.2-201ENST00000531656 154 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AC136932.1-201ENST00000574771 208 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 RN7SL793P-201ENST00000583259 296 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AC009229.3-201ENST00000608056 282 ntBASIC0.79□□□□□ -2.28
SNRNP35Q16560 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms