Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.8□□□□□ -1.96
SSRP1Q08945 AL162725.1-201ENST00000435405 301 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RPS29P21-201ENST00000496272 170 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.8□□□□□ -1.96
SSRP1Q08945 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU7-115P-201ENST00000516433 55 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU7-116P-201ENST00000516940 62 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 CBX3P4-201ENST00000538909 354 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 AL359075.3-201ENST00000613288 217 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.8□□□□□ -1.96
SSRP1Q08945 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.8□□□□□ -1.96
SSRP1Q08945 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.8□□□□□ -1.96
SSRP1Q08945 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
SSRP1Q08945 MIR21-201ENST00000362134 72 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 RNU6-653P-201ENST00000363074 106 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 RNU6-1205P-201ENST00000363625 106 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 U8.7-201ENST00000364940 136 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 MT-TR-201ENST00000387439 65 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.79□□□□□ -1.96
SSRP1Q08945 CST2P1-201ENST00000425770 87 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 AC026436.1-201ENST00000510537 270 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 RNU7-99P-201ENST00000516271 62 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 AP003357.1-201ENST00000604497 148 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 AP006437.1-201ENST00000641440 3685 ntBASIC2.79□□□□□ -1.96
SSRP1Q08945 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SSRP1Q08945 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSRP1Q08945 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SSRP1Q08945 RNU6-1020P-201ENST00000363684 107 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 RNU11-5P-201ENST00000391216 129 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 RNA5SP467-201ENST00000391274 118 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 BX510359.4-201ENST00000423750 193 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AC117454.1-201ENST00000491120 168 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.78□□□□□ -1.96
SSRP1Q08945 AC100767.1-201ENST00000528178 123 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AC005786.1-201ENST00000588553 154 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AC067747.1-201ENST00000608026 250 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SSRP1Q08945 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
SSRP1Q08945 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
SSRP1Q08945 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 RNU6-862P-201ENST00000362804 105 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 Y_RNA.293-201ENST00000364908 93 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 Y_RNA.308-201ENST00000365043 101 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 RNU6-144P-201ENST00000383951 107 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.77□□□□□ -1.97
SSRP1Q08945 HMGB3P3-201ENST00000510526 400 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 RNU1-142P-201ENST00000516682 145 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 RNU7-128P-201ENST00000517247 62 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.77□□□□□ -1.97
SSRP1Q08945 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSRP1Q08945 AC127455.1-201ENST00000565496 145 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 POLR3GP1-201ENST00000594073 261 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC073413.2-201ENST00000604332 360 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 SNORD14A-201ENST00000606526 91 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC098479.1-201ENST00000609225 154 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC004792.1-201ENST00000614523 137 ntBASIC2.77□□□□□ -1.97
SSRP1Q08945 AC245060.5-201ENST00000610778 3293 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SSRP1Q08945 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SSRP1Q08945 RNU6-923P-201ENST00000364753 107 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 RNU6-136P-201ENST00000384663 107 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 MIR518A2-201ENST00000384966 87 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 RNA5SP323-201ENST00000391094 133 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 RNY3P16-201ENST00000516338 101 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 AC024995.1-201ENST00000523014 93 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 AC021269.2-201ENST00000532318 330 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
SSRP1Q08945 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.76□□□□□ -1.97
SSRP1Q08945 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSRP1Q08945 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SSRP1Q08945 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
SSRP1Q08945 AC068700.1-201ENST00000565862 3754 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORA33-201ENST00000363664 130 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 RNU4-17P-201ENST00000365598 141 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 RNU1-52P-201ENST00000384190 164 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORA8.3-201ENST00000384679 139 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 RNU6-493P-201ENST00000391321 108 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 HMGN2P39-201ENST00000398005 273 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORA11.4-201ENST00000408823 129 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORA36B-201ENST00000410438 131 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 RNA5SP270-201ENST00000411361 118 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 PIGPP3-201ENST00000425307 415 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.75□□□□□ -1.97
SSRP1Q08945 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.75□□□□□ -1.97
SSRP1Q08945 AP002392.1-201ENST00000537692 208 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 AC103810.6-201ENST00000606708 136 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 Y_RNA.802-201ENST00000614892 130 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 AC010297.1-201ENST00000623948 149 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 AC022513.1-201ENST00000624512 117 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 CTSLP2-204ENST00000629029 392 ntBASIC2.75□□□□□ -1.97
SSRP1Q08945 SNORA72-201ENST00000384339 132 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms