Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.46□□□□□ -2.18
CALD1Q05682 PRDX4P1-201ENST00000507189 574 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 MIR2355-201ENST00000517199 87 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 AC055872.1-201ENST00000570978 278 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 AC091178.2-201ENST00000584401 117 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 MTND4LP32-201ENST00000636111 270 ntBASIC1.46□□□□□ -2.18
CALD1Q05682 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 RNU6-53P-201ENST00000365367 106 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.45□□□□□ -2.18
CALD1Q05682 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.45□□□□□ -2.18
CALD1Q05682 Y_RNA.653-201ENST00000459091 95 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 RNU6-470P-201ENST00000515954 104 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 RNU6-1278P-201ENST00000516130 107 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 RNU6-63P-201ENST00000516690 95 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
CALD1Q05682 AC005828.6-201ENST00000606610 232 ntBASIC1.45□□□□□ -2.18
CALD1Q05682 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
CALD1Q05682 MIR337-201ENST00000362281 93 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNU6-1283P-201ENST00000365314 105 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNU6-136P-201ENST00000384663 107 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 DYNLT3P2-201ENST00000442517 295 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNA5SP168-201ENST00000516642 112 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 MIR4295-201ENST00000585286 85 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 AL162424.1-201ENST00000602325 221 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 SNORA28-201ENST00000606769 126 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 AC127459.3-201ENST00000624328 466 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.44□□□□□ -2.18
CALD1Q05682 AC068647.2-201ENST00000637380 353 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 AC005592.1-201ENST00000566527 1640 ntBASIC1.44□□□□□ -2.18
CALD1Q05682 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.43□□□□□ -2.18
CALD1Q05682 RNU6-117P-201ENST00000365415 107 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 RNU6-1297P-201ENST00000384415 104 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 U8.16-201ENST00000391279 133 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.43□□□□□ -2.18
CALD1Q05682 RPL39P38-201ENST00000467018 153 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 OR9P1P-201ENST00000496431 281 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 RNU7-4P-201ENST00000516961 62 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.43□□□□□ -2.18
CALD1Q05682 AC004467.1-201ENST00000615678 330 ntBASIC1.43□□□□□ -2.18
CALD1Q05682 Y_RNA.142-201ENST00000363491 102 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 RNU4-76P-201ENST00000364509 141 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 RNU6-424P-201ENST00000384367 105 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 RNU11-5P-201ENST00000391216 129 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 MIR1285-1-201ENST00000408593 84 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.42□□□□□ -2.18
CALD1Q05682 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.42□□□□□ -2.18
CALD1Q05682 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.42□□□□□ -2.18
CALD1Q05682 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 RNU6-277P-201ENST00000516272 106 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 RNU6-165P-201ENST00000517170 99 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.42□□□□□ -2.18
CALD1Q05682 AC005730.3-201ENST00000583067 366 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 MIR8065-201ENST00000620577 100 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
CALD1Q05682 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CALD1Q05682 Y_RNA.243-201ENST00000364481 109 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 Y_RNA.259-201ENST00000364619 101 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 Y_RNA.314-201ENST00000365114 102 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 SNORD116-29-201ENST00000384516 83 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 Y_RNA.605-201ENST00000410577 105 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 AC096644.2-201ENST00000429278 159 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 AC093850.1-201ENST00000454121 251 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 RAB11AP2-201ENST00000545905 639 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 AC011476.5-201ENST00000615594 130 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 MIR1302-1-201ENST00000637932 143 ntBASIC1.41□□□□□ -2.18
CALD1Q05682 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CALD1Q05682 SNORD115-30-201ENST00000364117 82 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 RNU6-1310P-201ENST00000384153 107 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 MIR559-201ENST00000385188 96 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 RNU6-1096P-201ENST00000517089 102 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 RNU2-12P-201ENST00000517216 168 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 AC144568.1-201ENST00000520139 137 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 AC133104.2-201ENST00000615272 193 ntBASIC1.4□□□□□ -2.19
CALD1Q05682 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
CALD1Q05682 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CALD1Q05682 RNU6-199P-201ENST00000362954 107 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 RNY4P36-201ENST00000391116 96 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 RNU5A-5P-201ENST00000411054 116 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 RPS29P28-201ENST00000446439 141 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 FCF1P4-201ENST00000448326 183 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 HMGN1P7-201ENST00000491722 313 ntBASIC1.39□□□□□ -2.19
CALD1Q05682 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CALD1Q05682 Y_RNA.101-201ENST00000363154 102 ntBASIC1.38□□□□□ -2.19
CALD1Q05682 SNORA25.8-201ENST00000364831 128 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms