Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC096644.2-201ENST00000429278 159 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 ELOCP24-201ENST00000456370 334 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 AC024995.1-201ENST00000523014 93 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 AL590705.4-201ENST00000532209 134 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 AP002001.1-203ENST00000534002 267 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.2□□□□□ -2.22
CSTF1Q05048 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 AC138305.3-201ENST00000624988 240 ntBASIC1.2□□□□□ -2.22
CSTF1Q05048 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CSTF1Q05048 RNU6-1115P-201ENST00000362490 106 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 SNORD115-8-201ENST00000363856 82 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 SNORD115-38-201ENST00000365037 82 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 Y_RNA.387-201ENST00000383918 102 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 Y_RNA.579-201ENST00000390939 94 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.19□□□□□ -2.22
CSTF1Q05048 AC245047.3-201ENST00000429428 127 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
CSTF1Q05048 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.19□□□□□ -2.22
CSTF1Q05048 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
CSTF1Q05048 AC093303.1-201ENST00000514549 295 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 RNU6-699P-201ENST00000517081 110 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.19□□□□□ -2.22
CSTF1Q05048 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.19□□□□□ -2.22
CSTF1Q05048 AL021879.1-201ENST00000611756 288 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CSTF1Q05048 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CSTF1Q05048 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
CSTF1Q05048 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CSTF1Q05048 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.5-201ENST00000362334 102 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.31-201ENST00000362574 102 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.80-201ENST00000362996 102 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 U3.8-201ENST00000363675 217 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.358-201ENST00000365491 99 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-281P-201ENST00000384212 103 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.463-201ENST00000384271 102 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.485-201ENST00000384395 102 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-1297P-201ENST00000384415 104 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNY1P4-201ENST00000384595 115 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-950P-201ENST00000384651 107 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.557-201ENST00000384680 107 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-308P-201ENST00000390957 107 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-159P-201ENST00000391080 106 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.18□□□□□ -2.22
CSTF1Q05048 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.18□□□□□ -2.22
CSTF1Q05048 EIF1P2-201ENST00000428233 350 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC092423.1-201ENST00000430165 186 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.18□□□□□ -2.22
CSTF1Q05048 AC093019.1-201ENST00000443135 252 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 RNU6-966P-201ENST00000516479 104 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 Y_RNA.706-201ENST00000516933 99 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC023157.2-201ENST00000540596 141 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC004584.2-201ENST00000570407 410 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC021506.2-201ENST00000612354 169 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.18□□□□□ -2.22
CSTF1Q05048 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 Y_RNA.138-201ENST00000363462 102 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 MIR190B-201ENST00000401119 79 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 MTCYBP4-201ENST00000401524 249 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 RN7SKP200-201ENST00000410564 320 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.17□□□□□ -2.22
CSTF1Q05048 Y_RNA.653-201ENST00000459091 95 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 RNU7-87P-201ENST00000459343 62 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 RNU7-169P-201ENST00000459456 61 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 RPS27P22-201ENST00000478056 241 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.17□□□□□ -2.22
CSTF1Q05048 RNU6-470P-201ENST00000515954 104 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC091144.1-201ENST00000519573 138 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC055872.1-201ENST00000570978 278 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC022217.4-201ENST00000604389 163 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC010999.1-201ENST00000611856 324 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 PISRT1.1-201ENST00000616930 107 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC106754.2-201ENST00000623006 233 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 AC091925.1-201ENST00000623204 462 ntBASIC1.17□□□□□ -2.22
CSTF1Q05048 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.17□□□□□ -2.22
CSTF1Q05048 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
CSTF1Q05048 MIR369-201ENST00000362155 70 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RNU6-1301P-201ENST00000362724 104 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RNU5F-3P-201ENST00000363767 117 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 Y_RNA.813-201ENST00000364639 102 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 MIR329-1-201ENST00000385028 80 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RNU1-139P-201ENST00000391307 165 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 ELOCP21-201ENST00000412558 336 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms