Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU6-961P-201ENST00000363893 105 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 Y_RNA.474-201ENST00000384341 102 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-136P-201ENST00000384663 107 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 MIR660-201ENST00000385235 97 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-1156P-201ENST00000410365 100 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGCS1Q01581 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGCS1Q01581 AL137792.2-201ENST00000443484 235 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 MTCO3P10-201ENST00000455912 772 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGCS1Q01581 RPL39P38-201ENST00000467018 153 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-408P-201ENST00000515910 100 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-1291P-201ENST00000516591 104 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNA5SP168-201ENST00000516642 112 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-63P-201ENST00000516690 95 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-307P-201ENST00000516743 106 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGCS1Q01581 RPL21P9-201ENST00000556149 474 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 AC055872.1-201ENST00000570978 278 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGCS1Q01581 AL513423.1-201ENST00000621695 132 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
HMGCS1Q01581 AC005592.1-201ENST00000566527 1640 ntBASIC0.93□□□□□ -2.26
HMGCS1Q01581 SNORA1B-201ENST00000362535 133 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 Y_RNA.390-201ENST00000383932 102 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNU6-926P-201ENST00000384075 107 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNU6-890P-201ENST00000384121 107 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNU6-376P-201ENST00000384731 106 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 SNORA75.6-201ENST00000391318 127 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 MRPL35P3-201ENST00000421557 364 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGCS1Q01581 AC105758.1-201ENST00000506038 399 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.92□□□□□ -2.26
HMGCS1Q01581 AL162424.1-201ENST00000602325 221 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 AC005828.6-201ENST00000606610 232 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGCS1Q01581 AC127459.3-201ENST00000624328 466 ntBASIC0.92□□□□□ -2.26
HMGCS1Q01581 RNU4-76P-201ENST00000364509 141 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU6-117P-201ENST00000365415 107 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 Y_RNA.577-201ENST00000384794 101 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 SNORA69.1-201ENST00000390904 137 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 Y_RNA.592-201ENST00000410274 109 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 AC138393.2-201ENST00000414742 246 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGCS1Q01581 MRPS18CP6-201ENST00000423587 223 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 MTND4P28-201ENST00000426217 387 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 AC093850.1-201ENST00000454121 251 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RPL30P15-201ENST00000457129 321 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU7-169P-201ENST00000459456 61 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 OR9P1P-201ENST00000496431 281 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU2-56P-201ENST00000516826 190 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU6-341P-201ENST00000516973 96 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 RNU6-264P-201ENST00000517134 104 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 AC023442.1-201ENST00000531247 422 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.91□□□□□ -2.26
HMGCS1Q01581 MIR3684-201ENST00000579779 74 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 MIR5690-201ENST00000583739 73 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 AC004467.1-201ENST00000615678 330 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 MIR8070-201ENST00000616510 88 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGCS1Q01581 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
HMGCS1Q01581 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.9□□□□□ -2.27
HMGCS1Q01581 Y_RNA.243-201ENST00000364481 109 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 RNU6-424P-201ENST00000384367 105 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 MIR625-201ENST00000385047 85 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 MIR873-201ENST00000401120 77 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 RNU5A-5P-201ENST00000411054 116 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 RBMX2P4-201ENST00000441256 376 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 AC233266.1-201ENST00000454518 96 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 RNU6-470P-201ENST00000515954 104 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 RNU6-559P-201ENST00000516151 98 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 SNORA20.3-201ENST00000516880 132 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 MIR2355-201ENST00000517199 87 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGCS1Q01581 SNORA28-201ENST00000606769 126 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 AL355073.2-201ENST00000612106 557 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 AC242852.1-201ENST00000612151 96 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 AC244015.1-201ENST00000622301 99 ntBASIC0.9□□□□□ -2.27
HMGCS1Q01581 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HMGCS1Q01581 SNORD114-27-201ENST00000363766 70 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 RNA5SP511-201ENST00000410487 115 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 Z98949.2-201ENST00000440996 144 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 AC082651.2-201ENST00000496833 166 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 RNU6-1116P-201ENST00000517269 99 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGCS1Q01581 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
HMGCS1Q01581 MTND4LP32-201ENST00000636111 270 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms