Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.7□□□□□ -2.3
CDK5Q00535 RNU6-237P-201ENST00000515985 71 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 RNU6-1096P-201ENST00000517089 102 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AC022868.1-201ENST00000517767 391 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AL358944.1-201ENST00000528537 144 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.7□□□□□ -2.3
CDK5Q00535 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.7□□□□□ -2.3
CDK5Q00535 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AC004832.4-201ENST00000608952 331 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 AC127459.3-201ENST00000624328 466 ntBASIC0.7□□□□□ -2.3
CDK5Q00535 Y_RNA.88-201ENST00000363029 99 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 RNU4-40P-201ENST00000364351 143 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 RNU4-41P-201ENST00000364426 143 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 Y_RNA.243-201ENST00000364481 109 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AC092423.1-201ENST00000430165 186 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 Z98949.2-201ENST00000440996 144 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AC107399.1-201ENST00000451226 265 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.69□□□□□ -2.3
CDK5Q00535 AL049830.1-201ENST00000468034 425 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 RNU6-947P-201ENST00000516264 106 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 SNORD111.1-201ENST00000516421 86 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 RNU6-1116P-201ENST00000517269 99 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AF235103.2-201ENST00000525753 346 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.69□□□□□ -2.3
CDK5Q00535 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AC060780.3-201ENST00000589464 80 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 AC002553.4-201ENST00000616896 331 ntBASIC0.69□□□□□ -2.3
CDK5Q00535 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CDK5Q00535 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 SNORD114-7-201ENST00000362520 77 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 RNU6-1301P-201ENST00000362724 104 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CDK5Q00535 Y_RNA.482-201ENST00000384377 111 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 RNU2-64P-201ENST00000411315 191 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 AC114482.1-201ENST00000418010 247 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.68□□□□□ -2.3
CDK5Q00535 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
CDK5Q00535 RPL39P39-201ENST00000455840 151 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 snoU13.25-201ENST00000458945 104 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 AC069439.1-201ENST00000494739 167 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.68□□□□□ -2.3
CDK5Q00535 AC116353.2-201ENST00000505332 712 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 SCARNA16.2-201ENST00000516520 172 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 RNU6-63P-201ENST00000516690 95 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 MIR4498-201ENST00000577599 66 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 BNIP3P10-201ENST00000605360 577 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 AL096861.1-201ENST00000610899 123 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 AC007014.2-201ENST00000615581 479 ntBASIC0.68□□□□□ -2.3
CDK5Q00535 Y_RNA.6-201ENST00000362350 114 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 RNY1P10-201ENST00000363268 113 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 SNORD115-30-201ENST00000364117 82 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC233266.1-201ENST00000454518 96 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC120024.3-201ENST00000603167 156 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC242852.1-201ENST00000612151 96 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 MIR1244-1-201ENST00000612829 85 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC092794.2-201ENST00000620933 563 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 AC244015.1-201ENST00000622301 99 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 MIR1244-3-201ENST00000635744 85 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 MIR1244-2-201ENST00000636449 85 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 MIR1244-4-202ENST00000636813 85 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CDK5Q00535 RNU6-833P-201ENST00000363486 107 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 Y_RNA.336-201ENST00000365307 109 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 RNU6-1080P-201ENST00000383982 107 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 MIR200A-201ENST00000384875 90 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 MIR891A-201ENST00000401237 79 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 SNORD12B-201ENST00000410433 91 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 RNA5SP475-201ENST00000410568 110 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AL354751.2-201ENST00000415471 210 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.66□□□□□ -2.3
CDK5Q00535 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
CDK5Q00535 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.66□□□□□ -2.3
CDK5Q00535 AC245047.8-201ENST00000456455 284 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 LINC01399-202ENST00000458450 244 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 RNU7-21P-201ENST00000459430 62 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 RPL17P19-201ENST00000489069 552 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
CDK5Q00535 CYCTP-201ENST00000504253 315 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.66□□□□□ -2.3
CDK5Q00535 RNU2-12P-201ENST00000517216 168 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AC005899.2-201ENST00000584353 90 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AL391903.3-201ENST00000612158 163 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AL008636.1-201ENST00000625038 1018 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 AC027279.3-201ENST00000625055 122 ntBASIC0.66□□□□□ -2.3
CDK5Q00535 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CDK5Q00535 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
CDK5Q00535 AC008163.1-202ENST00000636004 2889 ntBASIC0.65□□□□□ -2.31
CDK5Q00535 Y_RNA.72-201ENST00000362894 103 ntBASIC0.65□□□□□ -2.31
CDK5Q00535 RNU6-136P-201ENST00000384663 107 ntBASIC0.65□□□□□ -2.31
CDK5Q00535 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
CDK5Q00535 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.65□□□□□ -2.31
CDK5Q00535 ELOCP24-201ENST00000456370 334 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 296.9 ms