Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU7-21P-201ENST00000459430 62 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNU6-1116P-201ENST00000517269 99 ntBASIC0.8□□□□□ -2.28
CBX1P83916 AC022868.1-201ENST00000517767 391 ntBASIC0.8□□□□□ -2.28
CBX1P83916 EIF1P4-201ENST00000572664 335 ntBASIC0.8□□□□□ -2.28
CBX1P83916 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.8□□□□□ -2.28
CBX1P83916 PRELID3BP2-201ENST00000605362 201 ntBASIC0.8□□□□□ -2.28
CBX1P83916 AC005828.6-201ENST00000606610 232 ntBASIC0.8□□□□□ -2.28
CBX1P83916 AL096861.1-201ENST00000610899 123 ntBASIC0.8□□□□□ -2.28
CBX1P83916 U4.5-201ENST00000617137 123 ntBASIC0.8□□□□□ -2.28
CBX1P83916 RNU6-454P-201ENST00000364292 107 ntBASIC0.79□□□□□ -2.28
CBX1P83916 RNU6-593P-201ENST00000364716 112 ntBASIC0.79□□□□□ -2.28
CBX1P83916 RNU6-136P-201ENST00000384663 107 ntBASIC0.79□□□□□ -2.28
CBX1P83916 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
CBX1P83916 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
CBX1P83916 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
CBX1P83916 AC016907.1-201ENST00000419483 435 ntBASIC0.79□□□□□ -2.28
CBX1P83916 CYCTP-201ENST00000504253 315 ntBASIC0.79□□□□□ -2.28
CBX1P83916 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.79□□□□□ -2.28
CBX1P83916 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
CBX1P83916 SNORA40.9-201ENST00000515895 93 ntBASIC0.79□□□□□ -2.28
CBX1P83916 RNU6-720P-201ENST00000516363 108 ntBASIC0.79□□□□□ -2.28
CBX1P83916 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.79□□□□□ -2.28
CBX1P83916 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CBX1P83916 AC080013.6-201ENST00000606185 215 ntBASIC0.79□□□□□ -2.28
CBX1P83916 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CBX1P83916 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CBX1P83916 RNA5SP432-201ENST00000362480 116 ntBASIC0.78□□□□□ -2.28
CBX1P83916 SNORD114-7-201ENST00000362520 77 ntBASIC0.78□□□□□ -2.28
CBX1P83916 Y_RNA.358-201ENST00000365491 99 ntBASIC0.78□□□□□ -2.28
CBX1P83916 RNU6-163P-201ENST00000384396 106 ntBASIC0.78□□□□□ -2.28
CBX1P83916 SNORD116-13-201ENST00000384408 92 ntBASIC0.78□□□□□ -2.28
CBX1P83916 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
CBX1P83916 RNU6-1050P-201ENST00000410388 107 ntBASIC0.78□□□□□ -2.28
CBX1P83916 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.78□□□□□ -2.28
CBX1P83916 U8.22-201ENST00000459141 133 ntBASIC0.78□□□□□ -2.28
CBX1P83916 RNU6-329P-201ENST00000459618 107 ntBASIC0.78□□□□□ -2.28
CBX1P83916 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.78□□□□□ -2.28
CBX1P83916 AC120024.3-201ENST00000603167 156 ntBASIC0.78□□□□□ -2.28
CBX1P83916 AL391903.3-201ENST00000612158 163 ntBASIC0.78□□□□□ -2.28
CBX1P83916 AC027279.3-201ENST00000625055 122 ntBASIC0.78□□□□□ -2.28
CBX1P83916 RNU6-623P-201ENST00000363143 105 ntBASIC0.77□□□□□ -2.29
CBX1P83916 Y_RNA.164-201ENST00000363709 102 ntBASIC0.77□□□□□ -2.29
CBX1P83916 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
CBX1P83916 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
CBX1P83916 RNU6-510P-201ENST00000391239 108 ntBASIC0.77□□□□□ -2.29
CBX1P83916 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.77□□□□□ -2.29
CBX1P83916 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
CBX1P83916 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.77□□□□□ -2.29
CBX1P83916 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
CBX1P83916 Y_RNA.670-201ENST00000516255 105 ntBASIC0.77□□□□□ -2.29
CBX1P83916 RNU6-63P-201ENST00000516690 95 ntBASIC0.77□□□□□ -2.29
CBX1P83916 Y_RNA.708-201ENST00000516950 96 ntBASIC0.77□□□□□ -2.29
CBX1P83916 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.77□□□□□ -2.29
CBX1P83916 MIR3688-2-201ENST00000636963 87 ntBASIC0.77□□□□□ -2.29
CBX1P83916 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
CBX1P83916 CASC19-280ENST00000642102 1351 ntBASIC0.77□□□□□ -2.29
CBX1P83916 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CBX1P83916 Y_RNA.3-201ENST00000362331 103 ntBASIC0.76□□□□□ -2.29
CBX1P83916 Y_RNA.243-201ENST00000364481 109 ntBASIC0.76□□□□□ -2.29
CBX1P83916 Y_RNA.336-201ENST00000365307 109 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RNU6-1310P-201ENST00000384153 107 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RNU6-318P-201ENST00000384283 103 ntBASIC0.76□□□□□ -2.29
CBX1P83916 SNORD115-47-201ENST00000391226 86 ntBASIC0.76□□□□□ -2.29
CBX1P83916 MIR548K-201ENST00000408406 116 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RNU6-321P-201ENST00000410912 106 ntBASIC0.76□□□□□ -2.29
CBX1P83916 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.76□□□□□ -2.29
CBX1P83916 PIGPP3-201ENST00000425307 415 ntBASIC0.76□□□□□ -2.29
CBX1P83916 AC092423.1-201ENST00000430165 186 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RPS3AP52-201ENST00000435639 297 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
CBX1P83916 MTATP6P26-201ENST00000445926 662 ntBASIC0.76□□□□□ -2.29
CBX1P83916 ELOCP24-201ENST00000456370 334 ntBASIC0.76□□□□□ -2.29
CBX1P83916 RNU6-113P-201ENST00000516653 101 ntBASIC0.76□□□□□ -2.29
CBX1P83916 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
CBX1P83916 AC018638.8-201ENST00000588755 281 ntBASIC0.76□□□□□ -2.29
CBX1P83916 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
CBX1P83916 MIR452-201ENST00000385020 85 ntBASIC0.75□□□□□ -2.29
CBX1P83916 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
CBX1P83916 MIR548F5-201ENST00000408421 86 ntBASIC0.75□□□□□ -2.29
CBX1P83916 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
CBX1P83916 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
CBX1P83916 AC136628.3-201ENST00000521868 290 ntBASIC0.75□□□□□ -2.29
CBX1P83916 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.75□□□□□ -2.29
CBX1P83916 MIR3192-201ENST00000584920 77 ntBASIC0.75□□□□□ -2.29
CBX1P83916 MIR4781-201ENST00000585250 76 ntBASIC0.75□□□□□ -2.29
CBX1P83916 AC009229.3-201ENST00000608056 282 ntBASIC0.75□□□□□ -2.29
CBX1P83916 RNU6-392P-201ENST00000364926 101 ntBASIC0.74□□□□□ -2.29
CBX1P83916 RNU6-601P-201ENST00000384540 107 ntBASIC0.74□□□□□ -2.29
CBX1P83916 Y_RNA.516-201ENST00000384541 124 ntBASIC0.74□□□□□ -2.29
CBX1P83916 RNU6-1105P-201ENST00000384774 107 ntBASIC0.74□□□□□ -2.29
CBX1P83916 RNU6-733P-201ENST00000410759 104 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AL354751.2-201ENST00000415471 210 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.74□□□□□ -2.29
CBX1P83916 FABP5P4-201ENST00000437203 171 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.74□□□□□ -2.29
CBX1P83916 snoU13.25-201ENST00000458945 104 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AC114811.1-201ENST00000507207 168 ntBASIC0.74□□□□□ -2.29
CBX1P83916 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms