Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC104332.1-201ENST00000440471 797 ntBASIC2.12□□□□□ -2.07
RAE1P78406 Y_RNA.638-201ENST00000459374 113 ntBASIC2.12□□□□□ -2.07
RAE1P78406 HMGB3P3-201ENST00000510526 400 ntBASIC2.12□□□□□ -2.07
RAE1P78406 SNORD116-28-201ENST00000516123 91 ntBASIC2.12□□□□□ -2.07
RAE1P78406 RNU7-99P-201ENST00000516271 62 ntBASIC2.12□□□□□ -2.07
RAE1P78406 RNU7-128P-201ENST00000517247 62 ntBASIC2.12□□□□□ -2.07
RAE1P78406 MIR4672-201ENST00000583126 81 ntBASIC2.12□□□□□ -2.07
RAE1P78406 AC011921.3-201ENST00000605540 361 ntBASIC2.12□□□□□ -2.07
RAE1P78406 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
RAE1P78406 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RAE1P78406 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
RAE1P78406 Y_RNA.292-201ENST00000364904 97 ntBASIC2.11□□□□□ -2.07
RAE1P78406 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
RAE1P78406 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
RAE1P78406 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
RAE1P78406 AL135786.1-201ENST00000415892 214 ntBASIC2.11□□□□□ -2.07
RAE1P78406 EBAG9P1-201ENST00000418955 543 ntBASIC2.11□□□□□ -2.07
RAE1P78406 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
RAE1P78406 SNORA31.11-201ENST00000516528 139 ntBASIC2.11□□□□□ -2.07
RAE1P78406 RNU6-63P-201ENST00000516690 95 ntBASIC2.11□□□□□ -2.07
RAE1P78406 SNORA31.15-201ENST00000516771 132 ntBASIC2.11□□□□□ -2.07
RAE1P78406 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
RAE1P78406 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
RAE1P78406 AC015720.1-201ENST00000565251 277 ntBASIC2.11□□□□□ -2.07
RAE1P78406 AC013791.1-201ENST00000616619 62 ntBASIC2.11□□□□□ -2.07
RAE1P78406 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RAE1P78406 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
RAE1P78406 RNU6-862P-201ENST00000362804 105 ntBASIC2.1□□□□□ -2.07
RAE1P78406 RNU6-899P-201ENST00000363947 107 ntBASIC2.1□□□□□ -2.07
RAE1P78406 Y_RNA.200-201ENST00000364018 102 ntBASIC2.1□□□□□ -2.07
RAE1P78406 RNU6-200P-201ENST00000364743 107 ntBASIC2.1□□□□□ -2.07
RAE1P78406 Y_RNA.304-201ENST00000365011 112 ntBASIC2.1□□□□□ -2.07
RAE1P78406 RNY4P28-201ENST00000365281 93 ntBASIC2.1□□□□□ -2.07
RAE1P78406 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.1□□□□□ -2.07
RAE1P78406 RNU6-376P-201ENST00000384731 106 ntBASIC2.1□□□□□ -2.07
RAE1P78406 RNU11-5P-201ENST00000391216 129 ntBASIC2.1□□□□□ -2.07
RAE1P78406 MIR1298-201ENST00000408783 112 ntBASIC2.1□□□□□ -2.07
RAE1P78406 AL162725.1-201ENST00000435405 301 ntBASIC2.1□□□□□ -2.07
RAE1P78406 AC099677.2-201ENST00000436385 175 ntBASIC2.1□□□□□ -2.07
RAE1P78406 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.1□□□□□ -2.07
RAE1P78406 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
RAE1P78406 RNU7-141P-201ENST00000459304 62 ntBASIC2.1□□□□□ -2.07
RAE1P78406 RPS26P45-201ENST00000471748 340 ntBASIC2.1□□□□□ -2.07
RAE1P78406 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.1□□□□□ -2.07
RAE1P78406 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
RAE1P78406 AC068647.2-201ENST00000637380 353 ntBASIC2.1□□□□□ -2.07
RAE1P78406 U6.108-201ENST00000637764 58 ntBASIC2.1□□□□□ -2.07
RAE1P78406 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAE1P78406 AP006437.1-201ENST00000641440 3685 ntBASIC2.1□□□□□ -2.07
RAE1P78406 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAE1P78406 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.09□□□□□ -2.07
RAE1P78406 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.09□□□□□ -2.07
RAE1P78406 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
RAE1P78406 SNORA33-201ENST00000363664 130 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU6-1048P-201ENST00000364054 107 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU6-1323P-201ENST00000384025 107 ntBASIC2.09□□□□□ -2.07
RAE1P78406 SNORA80E-201ENST00000384744 137 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU6-1186P-201ENST00000410429 97 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNA5SP511-201ENST00000410487 115 ntBASIC2.09□□□□□ -2.07
RAE1P78406 HSPE1P21-201ENST00000438283 308 ntBASIC2.09□□□□□ -2.07
RAE1P78406 U8.19-201ENST00000459095 133 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RPS29P21-201ENST00000496272 170 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU7-115P-201ENST00000516433 55 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU1-142P-201ENST00000516682 145 ntBASIC2.09□□□□□ -2.07
RAE1P78406 RNU7-116P-201ENST00000516940 62 ntBASIC2.09□□□□□ -2.07
RAE1P78406 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AP005660.1-201ENST00000522972 293 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AC130289.1-201ENST00000577321 73 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AC073413.2-201ENST00000604332 360 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AP003357.1-201ENST00000604497 148 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AL049779.4-201ENST00000604500 156 ntBASIC2.09□□□□□ -2.07
RAE1P78406 AC005972.2-201ENST00000604690 348 ntBASIC2.09□□□□□ -2.07
RAE1P78406 MIR548AY-201ENST00000617669 107 ntBASIC2.09□□□□□ -2.07
RAE1P78406 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAE1P78406 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RAE1P78406 RNA5SP323-201ENST00000391094 133 ntBASIC2.08□□□□□ -2.08
RAE1P78406 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
RAE1P78406 MTCO2P33-201ENST00000402100 465 ntBASIC2.08□□□□□ -2.08
RAE1P78406 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.08□□□□□ -2.08
RAE1P78406 RNU6-138P-201ENST00000515952 107 ntBASIC2.08□□□□□ -2.08
RAE1P78406 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
RAE1P78406 Y_RNA.700-201ENST00000516806 100 ntBASIC2.08□□□□□ -2.08
RAE1P78406 MIR5692C2-201ENST00000577959 77 ntBASIC2.08□□□□□ -2.08
RAE1P78406 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
RAE1P78406 MIR203B-201ENST00000636080 86 ntBASIC2.08□□□□□ -2.08
RAE1P78406 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAE1P78406 Y_RNA.83-201ENST00000363005 113 ntBASIC2.07□□□□□ -2.08
RAE1P78406 Y_RNA.111-201ENST00000363248 100 ntBASIC2.07□□□□□ -2.08
RAE1P78406 Y_RNA.199-201ENST00000364014 102 ntBASIC2.07□□□□□ -2.08
RAE1P78406 RNU4-13P-201ENST00000364019 141 ntBASIC2.07□□□□□ -2.08
RAE1P78406 Y_RNA.274-201ENST00000364714 101 ntBASIC2.07□□□□□ -2.08
RAE1P78406 MIR520G-201ENST00000385064 90 ntBASIC2.07□□□□□ -2.08
RAE1P78406 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RAE1P78406 RNU6-907P-201ENST00000390924 102 ntBASIC2.07□□□□□ -2.08
RAE1P78406 Y_RNA.626-201ENST00000411288 95 ntBASIC2.07□□□□□ -2.08
RAE1P78406 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
RAE1P78406 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
RAE1P78406 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.07□□□□□ -2.08
RAE1P78406 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms