Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SNORD78.2-201ENST00000391076 69 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 MIR934-201ENST00000401241 83 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 RAB28P5-201ENST00000427490 651 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 TOMM22P2-201ENST00000430735 237 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 AL160004.2-201ENST00000432935 350 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 FCF1P4-201ENST00000448326 183 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 CHEK2P4-201ENST00000450340 246 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 RNU6-970P-201ENST00000516312 107 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 AL442163.3-201ENST00000554110 156 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.35□□□□□ -2.19
RIPPLY3P57055 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 AC007485.1-201ENST00000616755 206 ntBASIC1.35□□□□□ -2.19
RIPPLY3P57055 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.35□□□□□ -2.19
RIPPLY3P57055 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.35□□□□□ -2.19
RIPPLY3P57055 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
RIPPLY3P57055 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.34□□□□□ -2.19
RIPPLY3P57055 RNU6-1264P-201ENST00000383891 107 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 Y_RNA.535-201ENST00000384612 99 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 RNA5SP467-201ENST00000391274 118 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 ELOCP21-201ENST00000412558 336 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MTCO3P19-201ENST00000415864 321 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 AC016909.1-201ENST00000415916 166 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MTND1P14-201ENST00000427400 950 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MTCO2P12-201ENST00000427426 682 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 AC099677.2-201ENST00000436385 175 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
RIPPLY3P57055 RPS27P22-201ENST00000478056 241 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 AC074133.1-201ENST00000515696 183 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 RNA5SP330-201ENST00000517096 96 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 AC023442.1-201ENST00000531247 422 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MIR4659A-201ENST00000580269 81 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.34□□□□□ -2.19
RIPPLY3P57055 MIR4272-201ENST00000635924 64 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MIR3674-201ENST00000636576 68 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
RIPPLY3P57055 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
RIPPLY3P57055 SNORA33-201ENST00000363664 130 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 Y_RNA.252-201ENST00000364556 101 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 SNORA16.1-201ENST00000364597 132 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 RNU6-407P-201ENST00000365280 104 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 Y_RNA.424-201ENST00000384063 103 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 NDUFB4P10-201ENST00000452541 359 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 AC023157.2-201ENST00000540596 141 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.33□□□□□ -2.2
RIPPLY3P57055 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
RIPPLY3P57055 AL606534.2-204ENST00000635008 178 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.33□□□□□ -2.2
RIPPLY3P57055 RNU6-961P-201ENST00000363893 105 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RNU1-133P-201ENST00000364867 167 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 Y_RNA.394-201ENST00000383942 103 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RNU6-1310P-201ENST00000384153 107 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RNY3P4-201ENST00000384428 101 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 CST2P1-201ENST00000425770 87 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.32□□□□□ -2.2
RIPPLY3P57055 SNORD65B-201ENST00000459126 73 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC010469.2-201ENST00000496412 480 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RNU4-77P-201ENST00000516692 156 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 RN7SKP295-201ENST00000517264 153 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RIPPLY3P57055 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 MIR5188-201ENST00000583467 113 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 AL138825.1-201ENST00000618587 192 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 uc_338.22-201ENST00000622722 187 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC138305.3-201ENST00000624988 240 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 U6.92-201ENST00000636464 89 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.32□□□□□ -2.2
RIPPLY3P57055 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
RIPPLY3P57055 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
RIPPLY3P57055 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC091812.1-201ENST00000432235 1948 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 Y_RNA.27-201ENST00000362540 103 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 Y_RNA.31-201ENST00000362574 102 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 Y_RNA.287-201ENST00000364853 94 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
RIPPLY3P57055 COX6CP14-201ENST00000469580 174 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC010409.1-201ENST00000487382 476 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 RNU6-911P-201ENST00000516523 104 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 SUB1P4-201ENST00000566062 339 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 MIR3618-201ENST00000580330 88 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 MIR4438-201ENST00000585271 93 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC005176.2-201ENST00000596933 147 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC006380.1-201ENST00000603598 186 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.31□□□□□ -2.2
RIPPLY3P57055 AL359075.3-201ENST00000613288 217 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 AC004467.1-201ENST00000615678 330 ntBASIC1.31□□□□□ -2.2
RIPPLY3P57055 RNU6-626P-201ENST00000363354 107 ntBASIC1.3□□□□□ -2.2
RIPPLY3P57055 RNU6-324P-201ENST00000363957 106 ntBASIC1.3□□□□□ -2.2
RIPPLY3P57055 RNU6-1019P-201ENST00000364424 107 ntBASIC1.3□□□□□ -2.2
RIPPLY3P57055 SNORD48-201ENST00000364953 64 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms