Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RNU6-1310P-201ENST00000384153 107 ntBASIC0.62□□□□□ -2.31
CMC4P56277 RNU6-318P-201ENST00000384283 103 ntBASIC0.62□□□□□ -2.31
CMC4P56277 Y_RNA.516-201ENST00000384541 124 ntBASIC0.62□□□□□ -2.31
CMC4P56277 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
CMC4P56277 Y_RNA.594-201ENST00000410373 140 ntBASIC0.62□□□□□ -2.31
CMC4P56277 RNA5SP475-201ENST00000410568 110 ntBASIC0.62□□□□□ -2.31
CMC4P56277 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.62□□□□□ -2.31
CMC4P56277 AC016907.1-201ENST00000419483 435 ntBASIC0.62□□□□□ -2.31
CMC4P56277 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
CMC4P56277 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.62□□□□□ -2.31
CMC4P56277 HSPE1P13-201ENST00000451143 297 ntBASIC0.62□□□□□ -2.31
CMC4P56277 LINC01399-202ENST00000458450 244 ntBASIC0.62□□□□□ -2.31
CMC4P56277 RNU6-625P-201ENST00000459412 107 ntBASIC0.62□□□□□ -2.31
CMC4P56277 RNU7-21P-201ENST00000459430 62 ntBASIC0.62□□□□□ -2.31
CMC4P56277 AC116353.2-201ENST00000505332 712 ntBASIC0.62□□□□□ -2.31
CMC4P56277 Y_RNA.682-201ENST00000516457 100 ntBASIC0.62□□□□□ -2.31
CMC4P56277 SCARNA16.2-201ENST00000516520 172 ntBASIC0.62□□□□□ -2.31
CMC4P56277 RNU6-1291P-201ENST00000516591 104 ntBASIC0.62□□□□□ -2.31
CMC4P56277 Y_RNA.708-201ENST00000516950 96 ntBASIC0.62□□□□□ -2.31
CMC4P56277 AC005899.2-201ENST00000584353 90 ntBASIC0.62□□□□□ -2.31
CMC4P56277 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.62□□□□□ -2.31
CMC4P56277 AC012557.2-201ENST00000605919 418 ntBASIC0.62□□□□□ -2.31
CMC4P56277 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
CMC4P56277 CASC19-280ENST00000642102 1351 ntBASIC0.61□□□□□ -2.31
CMC4P56277 RNU6-879P-201ENST00000364328 108 ntBASIC0.61□□□□□ -2.31
CMC4P56277 RNU4-41P-201ENST00000364426 143 ntBASIC0.61□□□□□ -2.31
CMC4P56277 U8.5-201ENST00000364528 136 ntBASIC0.61□□□□□ -2.31
CMC4P56277 Y_RNA.482-201ENST00000384377 111 ntBASIC0.61□□□□□ -2.31
CMC4P56277 SNORD116-4-201ENST00000384733 96 ntBASIC0.61□□□□□ -2.31
CMC4P56277 MIR891A-201ENST00000401237 79 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.61□□□□□ -2.31
CMC4P56277 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.61□□□□□ -2.31
CMC4P56277 AC093850.1-201ENST00000454121 251 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AC245047.8-201ENST00000456455 284 ntBASIC0.61□□□□□ -2.31
CMC4P56277 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.61□□□□□ -2.31
CMC4P56277 CYCTP-201ENST00000504253 315 ntBASIC0.61□□□□□ -2.31
CMC4P56277 SNORA40.9-201ENST00000515895 93 ntBASIC0.61□□□□□ -2.31
CMC4P56277 Y_RNA.670-201ENST00000516255 105 ntBASIC0.61□□□□□ -2.31
CMC4P56277 Y_RNA.676-201ENST00000516393 96 ntBASIC0.61□□□□□ -2.31
CMC4P56277 RNU6-1096P-201ENST00000517089 102 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
CMC4P56277 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
CMC4P56277 MIR4653-201ENST00000585107 83 ntBASIC0.61□□□□□ -2.31
CMC4P56277 FAM71BP1-201ENST00000604431 523 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AC108706.1-201ENST00000611053 297 ntBASIC0.61□□□□□ -2.31
CMC4P56277 AL391903.3-201ENST00000612158 163 ntBASIC0.61□□□□□ -2.31
CMC4P56277 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.61□□□□□ -2.31
CMC4P56277 MIR8070-201ENST00000616510 88 ntBASIC0.61□□□□□ -2.31
CMC4P56277 Y_RNA.2-201ENST00000362330 96 ntBASIC0.6□□□□□ -2.31
CMC4P56277 MIR526A1-201ENST00000384897 85 ntBASIC0.6□□□□□ -2.31
CMC4P56277 MIR1277-201ENST00000408536 78 ntBASIC0.6□□□□□ -2.31
CMC4P56277 RNU2-64P-201ENST00000411315 191 ntBASIC0.6□□□□□ -2.31
CMC4P56277 MTND3P8-201ENST00000412909 339 ntBASIC0.6□□□□□ -2.31
CMC4P56277 RPS4XP11-201ENST00000446897 772 ntBASIC0.6□□□□□ -2.31
CMC4P56277 U8.22-201ENST00000459141 133 ntBASIC0.6□□□□□ -2.31
CMC4P56277 RNU7-90P-201ENST00000459216 62 ntBASIC0.6□□□□□ -2.31
CMC4P56277 RNU6-947P-201ENST00000516264 106 ntBASIC0.6□□□□□ -2.31
CMC4P56277 RNU6-307P-201ENST00000516743 106 ntBASIC0.6□□□□□ -2.31
CMC4P56277 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.6□□□□□ -2.31
CMC4P56277 MIR4762-201ENST00000585261 75 ntBASIC0.6□□□□□ -2.31
CMC4P56277 AC013244.2-201ENST00000603396 103 ntBASIC0.6□□□□□ -2.31
CMC4P56277 AL096861.1-201ENST00000610899 123 ntBASIC0.6□□□□□ -2.31
CMC4P56277 AC002553.4-201ENST00000616896 331 ntBASIC0.6□□□□□ -2.31
CMC4P56277 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.6□□□□□ -2.31
CMC4P56277 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
CMC4P56277 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CMC4P56277 RNU1-93P-201ENST00000364704 169 ntBASIC0.59□□□□□ -2.31
CMC4P56277 Y_RNA.336-201ENST00000365307 109 ntBASIC0.59□□□□□ -2.31
CMC4P56277 Y_RNA.358-201ENST00000365491 99 ntBASIC0.59□□□□□ -2.31
CMC4P56277 MIR452-201ENST00000385020 85 ntBASIC0.59□□□□□ -2.31
CMC4P56277 SNORD115-47-201ENST00000391226 86 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AL162725.1-201ENST00000435405 301 ntBASIC0.59□□□□□ -2.31
CMC4P56277 RPS3AP52-201ENST00000435639 297 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.59□□□□□ -2.31
CMC4P56277 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.59□□□□□ -2.31
CMC4P56277 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AC022868.1-201ENST00000517767 391 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AF235103.2-201ENST00000525753 346 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.59□□□□□ -2.31
CMC4P56277 FAM106DP-201ENST00000586416 501 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
CMC4P56277 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
CMC4P56277 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
CMC4P56277 AC008163.1-202ENST00000636004 2889 ntBASIC0.58□□□□□ -2.32
CMC4P56277 Y_RNA.6-201ENST00000362350 114 ntBASIC0.58□□□□□ -2.32
CMC4P56277 Y_RNA.72-201ENST00000362894 103 ntBASIC0.58□□□□□ -2.32
CMC4P56277 SNORD116-13-201ENST00000384408 92 ntBASIC0.58□□□□□ -2.32
CMC4P56277 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
CMC4P56277 MIR548F5-201ENST00000408421 86 ntBASIC0.58□□□□□ -2.32
CMC4P56277 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.58□□□□□ -2.32
CMC4P56277 MTND1P34-201ENST00000438556 671 ntBASIC0.58□□□□□ -2.32
CMC4P56277 AC104332.1-201ENST00000440471 797 ntBASIC0.58□□□□□ -2.32
CMC4P56277 AC093019.1-201ENST00000443135 252 ntBASIC0.58□□□□□ -2.32
CMC4P56277 AC107399.1-201ENST00000451226 265 ntBASIC0.58□□□□□ -2.32
CMC4P56277 ELOCP24-201ENST00000456370 334 ntBASIC0.58□□□□□ -2.32
CMC4P56277 RNU7-87P-201ENST00000459343 62 ntBASIC0.58□□□□□ -2.32
CMC4P56277 RPL17P19-201ENST00000489069 552 ntBASIC0.58□□□□□ -2.32
CMC4P56277 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
CMC4P56277 SNORD111.1-201ENST00000516421 86 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms