Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MIR6129-201ENST00000616087 109 ntBASIC2.22□□□□□ -2.05
FOXG1P55316 AP001340.1-201ENST00000624405 217 ntBASIC2.22□□□□□ -2.05
FOXG1P55316 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
FOXG1P55316 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXG1P55316 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
FOXG1P55316 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXG1P55316 RNU6-235P-201ENST00000362644 107 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 Y_RNA.251-201ENST00000364551 99 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 Y_RNA.393-201ENST00000383936 102 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 SNORD14D-201ENST00000384390 87 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 SNORD116-13-201ENST00000384408 92 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
FOXG1P55316 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXG1P55316 AL355796.1-201ENST00000406706 323 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 MIR1185-2-201ENST00000408687 86 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
FOXG1P55316 RPS27P1-201ENST00000450552 247 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXG1P55316 SNRPGP8-201ENST00000454064 226 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXG1P55316 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
FOXG1P55316 MIR449C-201ENST00000516047 92 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 SCARNA17.1-201ENST00000516211 143 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 SCARNA17.2-201ENST00000516334 143 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 RNU7-115P-201ENST00000516433 55 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXG1P55316 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXG1P55316 MIR3646-201ENST00000578301 84 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 MIR5688-201ENST00000580619 83 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 SCARNA17.4-201ENST00000614296 143 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 MIR548AY-201ENST00000617669 107 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 AC010297.1-201ENST00000623948 149 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXG1P55316 Z82195.2-201ENST00000612348 18351 ntBASIC2.21□□□□□ -2.06
FOXG1P55316 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
FOXG1P55316 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
FOXG1P55316 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FOXG1P55316 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
FOXG1P55316 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXG1P55316 RNY4P18-201ENST00000391107 89 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 RPL36AP48-201ENST00000485521 314 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 RNU6-1337P-201ENST00000516525 95 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 SNORA31.15-201ENST00000516771 132 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 AC109329.2-201ENST00000519658 482 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 MIR4446-201ENST00000578505 67 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 AC103810.1-201ENST00000579873 453 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 AC023043.3-201ENST00000593113 385 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXG1P55316 MIR7515-201ENST00000637837 67 ntBASIC2.2□□□□□ -2.06
FOXG1P55316 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXG1P55316 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXG1P55316 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXG1P55316 RNU6-834P-201ENST00000362367 110 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 RNU4-82P-201ENST00000362443 140 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 SNORD45.3-201ENST00000363836 72 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 RNU6-915P-201ENST00000364943 103 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 SNORA20B-201ENST00000384220 132 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 Y_RNA.563-201ENST00000384707 108 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 MIR586-201ENST00000385035 97 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 Y_RNA.587-201ENST00000391210 103 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 MIR1278-201ENST00000408753 81 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 RNU6-1064P-201ENST00000410626 104 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 Z98742.2-201ENST00000431564 187 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 AL121890.1-201ENST00000435457 205 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 HSPE1P13-201ENST00000451143 297 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXG1P55316 RNA5SP112-201ENST00000515937 99 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 AC027419.1-201ENST00000522976 328 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 AC079598.5-201ENST00000547460 117 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 U7.2-201ENST00000607576 63 ntBASIC2.19□□□□□ -2.06
FOXG1P55316 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXG1P55316 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXG1P55316 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXG1P55316 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 RNU6-1298P-201ENST00000362456 101 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 RNU6-486P-201ENST00000363116 107 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
FOXG1P55316 SNORA75.5-201ENST00000391291 81 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 YWHAEP4-201ENST00000505390 198 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 RNU5F-4P-201ENST00000516581 114 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 RNU6-63P-201ENST00000516690 95 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 POLR3GP1-201ENST00000594073 261 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 AC120024.3-201ENST00000603167 156 ntBASIC2.18□□□□□ -2.06
FOXG1P55316 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
FOXG1P55316 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXG1P55316 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXG1P55316 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
FOXG1P55316 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXG1P55316 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXG1P55316 AL356292.1-201ENST00000283110 373 ntBASIC2.17□□□□□ -2.06
FOXG1P55316 SNORD32B-201ENST00000364460 84 ntBASIC2.17□□□□□ -2.06
FOXG1P55316 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
FOXG1P55316 RNU6-476P-201ENST00000384726 107 ntBASIC2.17□□□□□ -2.06
FOXG1P55316 MIR873-201ENST00000401120 77 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms