Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORD78.2-201ENST00000391076 69 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 Y_RNA.645-201ENST00000391229 102 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 MRPL35P1-201ENST00000404272 572 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 AL354751.2-201ENST00000415471 210 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 AL160004.2-201ENST00000432935 350 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
HMGCS2P54868 RNA5SP220-201ENST00000516298 104 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 RNU6-966P-201ENST00000516479 104 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 RN7SKP295-201ENST00000517264 153 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMGCS2P54868 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCS2P54868 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCS2P54868 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGCS2P54868 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCS2P54868 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCS2P54868 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.28-201ENST00000362554 111 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.101-201ENST00000363154 102 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.128-201ENST00000363391 112 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.216-201ENST00000364205 93 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 SNORA63D-201ENST00000364359 132 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 RNU6-1019P-201ENST00000364424 107 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 SNORA20B-201ENST00000384220 132 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR1302-11-201ENST00000408051 138 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR1302-9-201ENST00000408365 138 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR1302-10-201ENST00000408734 138 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 RNU6-1199P-201ENST00000411249 104 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MTCO3P19-201ENST00000415864 321 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 FCF1P4-201ENST00000448326 183 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.631-201ENST00000459607 101 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 RNU6-475P-201ENST00000516073 104 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 Y_RNA.701-201ENST00000516812 110 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC020661.2-201ENST00000560114 134 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC069114.2-201ENST00000604699 304 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC005828.6-201ENST00000606610 232 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR1302-2-201ENST00000607096 138 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR8074-201ENST00000615081 81 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC004467.1-201ENST00000615678 330 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC010205.1-201ENST00000616668 449 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 U6.73-201ENST00000619194 103 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 AC134503.1-201ENST00000633048 54 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 U6.115-201ENST00000636045 103 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGCS2P54868 AC010615.1-201ENST00000594254 1764 ntBASIC1.42□□□□□ -2.18
HMGCS2P54868 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGCS2P54868 RNU6-626P-201ENST00000363354 107 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 Y_RNA.243-201ENST00000364481 109 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 Y_RNA.361-201ENST00000365515 120 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 RNU6-20P-201ENST00000384106 107 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 Y_RNA.458-201ENST00000384240 102 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMGCS2P54868 MIR1253-201ENST00000408273 105 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 MTND1P14-201ENST00000427400 950 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCS2P54868 MTCYBP6-201ENST00000441810 138 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC010598.1-201ENST00000510378 103 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC025465.3-201ENST00000510570 311 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGCS2P54868 RNU6-1146P-201ENST00000516282 102 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 Y_RNA.711-201ENST00000516993 102 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC023442.1-201ENST00000531247 422 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 AC022432.1-201ENST00000595739 310 ntBASIC1.41□□□□□ -2.18
HMGCS2P54868 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGCS2P54868 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCS2P54868 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 RNA5SP475-201ENST00000410568 110 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGCS2P54868 MTCO2P12-201ENST00000427426 682 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS2P54868 AC005002.2-201ENST00000438228 269 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 RPS27P1-201ENST00000450552 247 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 RPS26P45-201ENST00000471748 340 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AL163195.1-201ENST00000496941 348 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 RNU6-1153P-201ENST00000516760 105 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AC027419.1-201ENST00000522976 328 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS2P54868 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.4□□□□□ -2.19
HMGCS2P54868 MIR3171-201ENST00000584270 74 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AC104695.3-201ENST00000604052 296 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AL021879.1-201ENST00000611756 288 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 AL138825.1-201ENST00000618587 192 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS2P54868 MIR6767-201ENST00000637302 66 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCS2P54868 AC005592.1-201ENST00000566527 1640 ntBASIC1.4□□□□□ -2.19
HMGCS2P54868 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMGCS2P54868 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 SNORD115-30-201ENST00000364117 82 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 SNORA22B-201ENST00000383876 138 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms