Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 SNORA3A-201ENST00000364113 130 ntBASIC2.64□□□□□ -1.99
NEK4P51957 RNU6-200P-201ENST00000364743 107 ntBASIC2.64□□□□□ -1.99
NEK4P51957 MIR1298-201ENST00000408783 112 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
NEK4P51957 AL162725.1-201ENST00000435405 301 ntBASIC2.64□□□□□ -1.99
NEK4P51957 RNU7-141P-201ENST00000459304 62 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.64□□□□□ -1.99
NEK4P51957 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.64□□□□□ -1.99
NEK4P51957 AC015720.1-201ENST00000565251 277 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AC005972.2-201ENST00000604690 348 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AL359075.3-201ENST00000613288 217 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AC013791.1-201ENST00000616619 62 ntBASIC2.64□□□□□ -1.99
NEK4P51957 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
NEK4P51957 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NEK4P51957 AC134026.1-201ENST00000623249 2239 ntBASIC2.63□□□□□ -1.99
NEK4P51957 RNA5SP289-201ENST00000362332 137 ntBASIC2.63□□□□□ -1.99
NEK4P51957 SNORA33-201ENST00000363664 130 ntBASIC2.63□□□□□ -1.99
NEK4P51957 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.63□□□□□ -1.99
NEK4P51957 RNU6-1323P-201ENST00000384025 107 ntBASIC2.63□□□□□ -1.99
NEK4P51957 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
NEK4P51957 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
NEK4P51957 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
NEK4P51957 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
NEK4P51957 RNU11-3P-201ENST00000391111 133 ntBASIC2.63□□□□□ -1.99
NEK4P51957 RNA5SP465-201ENST00000391195 109 ntBASIC2.63□□□□□ -1.99
NEK4P51957 RNU6-1186P-201ENST00000410429 97 ntBASIC2.63□□□□□ -1.99
NEK4P51957 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
NEK4P51957 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.63□□□□□ -1.99
NEK4P51957 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.63□□□□□ -1.99
NEK4P51957 MIR5692C2-201ENST00000577959 77 ntBASIC2.63□□□□□ -1.99
NEK4P51957 AC068647.2-201ENST00000637380 353 ntBASIC2.63□□□□□ -1.99
NEK4P51957 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEK4P51957 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEK4P51957 Y_RNA.199-201ENST00000364014 102 ntBASIC2.62□□□□□ -1.99
NEK4P51957 U8.7-201ENST00000364940 136 ntBASIC2.62□□□□□ -1.99
NEK4P51957 Y_RNA.304-201ENST00000365011 112 ntBASIC2.62□□□□□ -1.99
NEK4P51957 MIR597-201ENST00000384968 97 ntBASIC2.62□□□□□ -1.99
NEK4P51957 MTCO2P33-201ENST00000402100 465 ntBASIC2.62□□□□□ -1.99
NEK4P51957 AL355497.1-201ENST00000406262 551 ntBASIC2.62□□□□□ -1.99
NEK4P51957 Y_RNA.626-201ENST00000411288 95 ntBASIC2.62□□□□□ -1.99
NEK4P51957 HMGN2P3-201ENST00000433603 273 ntBASIC2.62□□□□□ -1.99
NEK4P51957 HMGN2P5-201ENST00000436882 273 ntBASIC2.62□□□□□ -1.99
NEK4P51957 HSPE1P21-201ENST00000438283 308 ntBASIC2.62□□□□□ -1.99
NEK4P51957 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.62□□□□□ -1.99
NEK4P51957 RNU6-138P-201ENST00000515952 107 ntBASIC2.62□□□□□ -1.99
NEK4P51957 RNA5SP281-201ENST00000516504 135 ntBASIC2.62□□□□□ -1.99
NEK4P51957 AP003357.1-201ENST00000604497 148 ntBASIC2.62□□□□□ -1.99
NEK4P51957 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
NEK4P51957 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NEK4P51957 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEK4P51957 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NEK4P51957 AL135786.1-201ENST00000415892 214 ntBASIC2.61□□□□□ -1.99
NEK4P51957 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.61□□□□□ -1.99
NEK4P51957 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.61□□□□□ -1.99
NEK4P51957 RNU7-115P-201ENST00000516433 55 ntBASIC2.61□□□□□ -1.99
NEK4P51957 RNU1-142P-201ENST00000516682 145 ntBASIC2.61□□□□□ -1.99
NEK4P51957 AP005660.1-201ENST00000522972 293 ntBASIC2.61□□□□□ -1.99
NEK4P51957 AC024995.1-201ENST00000523014 93 ntBASIC2.61□□□□□ -1.99
NEK4P51957 MIR5002-201ENST00000584713 97 ntBASIC2.61□□□□□ -1.99
NEK4P51957 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.61□□□□□ -1.99
NEK4P51957 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NEK4P51957 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NEK4P51957 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEK4P51957 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.6□□□□□ -1.99
NEK4P51957 Y_RNA.83-201ENST00000363005 113 ntBASIC2.6□□□□□ -1.99
NEK4P51957 Y_RNA.274-201ENST00000364714 101 ntBASIC2.6□□□□□ -1.99
NEK4P51957 RNU6-136P-201ENST00000384663 107 ntBASIC2.6□□□□□ -1.99
NEK4P51957 RNU6-376P-201ENST00000384731 106 ntBASIC2.6□□□□□ -1.99
NEK4P51957 AC117454.1-201ENST00000491120 168 ntBASIC2.6□□□□□ -1.99
NEK4P51957 RPS29P21-201ENST00000496272 170 ntBASIC2.6□□□□□ -1.99
NEK4P51957 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.6□□□□□ -1.99
NEK4P51957 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.6□□□□□ -1.99
NEK4P51957 RNU7-116P-201ENST00000516940 62 ntBASIC2.6□□□□□ -1.99
NEK4P51957 SNORA31.25-201ENST00000517242 134 ntBASIC2.6□□□□□ -1.99
NEK4P51957 MIR4446-201ENST00000578505 67 ntBASIC2.6□□□□□ -1.99
NEK4P51957 AC073413.2-201ENST00000604332 360 ntBASIC2.6□□□□□ -1.99
NEK4P51957 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
NEK4P51957 MIR548AY-201ENST00000617669 107 ntBASIC2.6□□□□□ -1.99
NEK4P51957 AL365265.1-201ENST00000621045 234 ntBASIC2.6□□□□□ -1.99
NEK4P51957 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
NEK4P51957 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
NEK4P51957 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEK4P51957 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEK4P51957 AC068700.1-201ENST00000565862 3754 ntBASIC2.59□□□□□ -1.99
NEK4P51957 AC245060.5-201ENST00000610778 3293 ntBASIC2.59□□□□□ -1.99
NEK4P51957 SNORA11.4-201ENST00000408823 129 ntBASIC2.59□□□□□ -1.99
NEK4P51957 RPS26P45-201ENST00000471748 340 ntBASIC2.59□□□□□ -1.99
NEK4P51957 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
NEK4P51957 Y_RNA.700-201ENST00000516806 100 ntBASIC2.59□□□□□ -1.99
NEK4P51957 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
NEK4P51957 AC024405.2-202ENST00000532731 184 ntBASIC2.59□□□□□ -1.99
NEK4P51957 POLR3GP1-201ENST00000594073 261 ntBASIC2.59□□□□□ -1.99
NEK4P51957 RPL12P50-201ENST00000603116 116 ntBASIC2.59□□□□□ -1.99
NEK4P51957 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
NEK4P51957 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
NEK4P51957 MIR411-201ENST00000362239 96 ntBASIC2.58□□□□□ -2
NEK4P51957 RNU4-13P-201ENST00000364019 141 ntBASIC2.58□□□□□ -2
NEK4P51957 Y_RNA.297-201ENST00000364950 91 ntBASIC2.58□□□□□ -2
NEK4P51957 RNA5SP323-201ENST00000391094 133 ntBASIC2.58□□□□□ -2
NEK4P51957 RNU11-5P-201ENST00000391216 129 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms