Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC005042.3-201ENST00000453230 174 ntBASIC1.84□□□□□ -2.11
CLK1P49759 RNU1-131P-201ENST00000458943 161 ntBASIC1.84□□□□□ -2.11
CLK1P49759 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.84□□□□□ -2.11
CLK1P49759 RNU6-545P-201ENST00000362681 104 ntBASIC1.83□□□□□ -2.12
CLK1P49759 SNORD27-201ENST00000363981 72 ntBASIC1.83□□□□□ -2.12
CLK1P49759 SNORA20.1-201ENST00000364790 130 ntBASIC1.83□□□□□ -2.12
CLK1P49759 SNORA70B-201ENST00000384210 135 ntBASIC1.83□□□□□ -2.12
CLK1P49759 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
CLK1P49759 Y_RNA.569-201ENST00000384749 103 ntBASIC1.83□□□□□ -2.12
CLK1P49759 TOMM22P2-201ENST00000430735 237 ntBASIC1.83□□□□□ -2.12
CLK1P49759 MTCO1P5-201ENST00000433573 344 ntBASIC1.83□□□□□ -2.12
CLK1P49759 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
CLK1P49759 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.83□□□□□ -2.12
CLK1P49759 RNVU1-2-201ENST00000516326 135 ntBASIC1.83□□□□□ -2.12
CLK1P49759 RNU5F-4P-201ENST00000516581 114 ntBASIC1.83□□□□□ -2.12
CLK1P49759 RNU2-31P-201ENST00000516954 155 ntBASIC1.83□□□□□ -2.12
CLK1P49759 MIR3169-201ENST00000578032 83 ntBASIC1.83□□□□□ -2.12
CLK1P49759 MIR3668-201ENST00000582138 75 ntBASIC1.83□□□□□ -2.12
CLK1P49759 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
CLK1P49759 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLK1P49759 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.83□□□□□ -2.12
CLK1P49759 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLK1P49759 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
CLK1P49759 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLK1P49759 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU6-414P-201ENST00000363705 104 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNY1-201ENST00000364228 113 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU6-1305P-201ENST00000364353 104 ntBASIC1.82□□□□□ -2.12
CLK1P49759 Y_RNA.277-201ENST00000364754 102 ntBASIC1.82□□□□□ -2.12
CLK1P49759 SNORA72.2-201ENST00000365028 127 ntBASIC1.82□□□□□ -2.12
CLK1P49759 Y_RNA.361-201ENST00000365515 120 ntBASIC1.82□□□□□ -2.12
CLK1P49759 Y_RNA.383-201ENST00000383855 97 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU6-1310P-201ENST00000384153 107 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
CLK1P49759 MIR1283-1-201ENST00000408494 87 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RPL23AP36-201ENST00000413895 458 ntBASIC1.82□□□□□ -2.12
CLK1P49759 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLK1P49759 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.82□□□□□ -2.12
CLK1P49759 AL357134.1-201ENST00000445848 426 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU7-14P-201ENST00000459331 62 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RPL23AP94-201ENST00000512518 302 ntBASIC1.82□□□□□ -2.12
CLK1P49759 RNU6-155P-201ENST00000516347 100 ntBASIC1.82□□□□□ -2.12
CLK1P49759 AC141273.2-201ENST00000618989 130 ntBASIC1.82□□□□□ -2.12
CLK1P49759 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLK1P49759 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.82□□□□□ -2.12
CLK1P49759 AC245060.5-201ENST00000610778 3293 ntBASIC1.82□□□□□ -2.12
CLK1P49759 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.82□□□□□ -2.12
CLK1P49759 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CLK1P49759 SNORD115-30-201ENST00000364117 82 ntBASIC1.81□□□□□ -2.12
CLK1P49759 SNORD31B-201ENST00000364977 69 ntBASIC1.81□□□□□ -2.12
CLK1P49759 Y_RNA.552-201ENST00000384665 112 ntBASIC1.81□□□□□ -2.12
CLK1P49759 EBAG9P1-201ENST00000418955 543 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
CLK1P49759 POLR2KP2-201ENST00000438155 177 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CLK1P49759 AC016925.1-201ENST00000458303 298 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC091959.1-201ENST00000495857 238 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.81□□□□□ -2.12
CLK1P49759 RNU6-436P-201ENST00000516171 114 ntBASIC1.81□□□□□ -2.12
CLK1P49759 RNU6-107P-201ENST00000516643 102 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.81□□□□□ -2.12
CLK1P49759 AC087441.2-201ENST00000529141 262 ntBASIC1.81□□□□□ -2.12
CLK1P49759 RPL21P9-201ENST00000556149 474 ntBASIC1.81□□□□□ -2.12
CLK1P49759 MIR3145-201ENST00000580727 82 ntBASIC1.81□□□□□ -2.12
CLK1P49759 DEFB117-201ENST00000602356 141 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC009779.6-201ENST00000603972 165 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC005828.6-201ENST00000606610 232 ntBASIC1.81□□□□□ -2.12
CLK1P49759 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.81□□□□□ -2.12
CLK1P49759 AC006001.4-201ENST00000622243 395 ntBASIC1.81□□□□□ -2.12
CLK1P49759 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CLK1P49759 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.8□□□□□ -2.12
CLK1P49759 Y_RNA.44-201ENST00000362676 108 ntBASIC1.8□□□□□ -2.12
CLK1P49759 Y_RNA.76-201ENST00000362931 109 ntBASIC1.8□□□□□ -2.12
CLK1P49759 Y_RNA.243-201ENST00000364481 109 ntBASIC1.8□□□□□ -2.12
CLK1P49759 Y_RNA.275-201ENST00000364726 110 ntBASIC1.8□□□□□ -2.12
CLK1P49759 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
CLK1P49759 MT-TR-201ENST00000387439 65 ntBASIC1.8□□□□□ -2.12
CLK1P49759 SNORA53-201ENST00000391141 249 ntBASIC1.8□□□□□ -2.12
CLK1P49759 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLK1P49759 MIR300-201ENST00000401138 83 ntBASIC1.8□□□□□ -2.12
CLK1P49759 AL023284.1-201ENST00000403956 276 ntBASIC1.8□□□□□ -2.12
CLK1P49759 MIR1185-2-201ENST00000408687 86 ntBASIC1.8□□□□□ -2.12
CLK1P49759 RNA5SP475-201ENST00000410568 110 ntBASIC1.8□□□□□ -2.12
CLK1P49759 RNU6-651P-201ENST00000411040 105 ntBASIC1.8□□□□□ -2.12
CLK1P49759 HMGN2P18-201ENST00000450680 270 ntBASIC1.8□□□□□ -2.12
CLK1P49759 TRBV12-1-201ENST00000479785 344 ntBASIC1.8□□□□□ -2.12
CLK1P49759 RNU6-191P-201ENST00000516295 94 ntBASIC1.8□□□□□ -2.12
CLK1P49759 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.8□□□□□ -2.12
CLK1P49759 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.8□□□□□ -2.12
CLK1P49759 BX284668.6-201ENST00000606899 438 ntBASIC1.8□□□□□ -2.12
CLK1P49759 U6.115-201ENST00000636045 103 ntBASIC1.8□□□□□ -2.12
CLK1P49759 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLK1P49759 UBE2WP1-201ENST00000362030 340 ntBASIC1.79□□□□□ -2.12
CLK1P49759 MIR340-201ENST00000362125 95 ntBASIC1.79□□□□□ -2.12
CLK1P49759 Y_RNA.54-201ENST00000362766 105 ntBASIC1.79□□□□□ -2.12
CLK1P49759 RNU4-80P-201ENST00000363200 141 ntBASIC1.79□□□□□ -2.12
CLK1P49759 Y_RNA.269-201ENST00000364685 89 ntBASIC1.79□□□□□ -2.12
CLK1P49759 RNU6-740P-201ENST00000364734 105 ntBASIC1.79□□□□□ -2.12
CLK1P49759 RNA5SP126-201ENST00000365092 109 ntBASIC1.79□□□□□ -2.12
CLK1P49759 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms