Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 Y_RNA.498-201ENST00000384460 102 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU6-876P-201ENST00000391295 104 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 SNORD12B-201ENST00000410433 91 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU6-370P-201ENST00000411008 104 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU5A-5P-201ENST00000411054 116 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AC074133.1-201ENST00000515696 183 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.85□□□□□ -2.27
CX3CR1P49238 SNORA31.4-201ENST00000516049 129 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU6-1291P-201ENST00000516591 104 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AC080078.3-201ENST00000605407 463 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AC022306.2-201ENST00000617563 647 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 MIR3674-201ENST00000636576 68 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 TPTEP1-208ENST00000636884 213 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 Y_RNA.243-201ENST00000364481 109 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 Y_RNA.267-201ENST00000364679 109 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 Y_RNA.361-201ENST00000365515 120 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 RNU6-136P-201ENST00000384663 107 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 MIR19B1-201ENST00000384829 87 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.84□□□□□ -2.27
CX3CR1P49238 Z98949.2-201ENST00000440996 144 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 RBMX2P4-201ENST00000441256 376 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 RNU6-408P-201ENST00000515910 100 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 RNU6-1116P-201ENST00000517269 99 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 AL162424.1-201ENST00000602325 221 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 AL117336.2-201ENST00000602435 335 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 snoU13.31-201ENST00000607291 104 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 PISRT1.1-201ENST00000616930 107 ntBASIC0.84□□□□□ -2.27
CX3CR1P49238 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.84□□□□□ -2.27
CX3CR1P49238 Y_RNA.101-201ENST00000363154 102 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 Y_RNA.172-201ENST00000363765 102 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-53P-201ENST00000365367 106 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-890P-201ENST00000384121 107 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-708P-201ENST00000384217 107 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 Y_RNA.592-201ENST00000410274 109 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 CHEK2P4-201ENST00000450340 246 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.83□□□□□ -2.28
CX3CR1P49238 snoU13.25-201ENST00000458945 104 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 MIR2053-201ENST00000459295 91 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU7-94P-201ENST00000459576 63 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 AC022493.2-201ENST00000506122 481 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 RNU6-341P-201ENST00000516973 96 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.83□□□□□ -2.28
CX3CR1P49238 AC023442.1-201ENST00000531247 422 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 MIR4769-201ENST00000584126 77 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
CX3CR1P49238 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CX3CR1P49238 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CX3CR1P49238 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.82□□□□□ -2.28
CX3CR1P49238 SNORD115-30-201ENST00000364117 82 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU4-41P-201ENST00000364426 143 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6-1283P-201ENST00000365314 105 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6-926P-201ENST00000384075 107 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 SNORA75.6-201ENST00000391318 127 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 MIR873-201ENST00000401120 77 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6-1156P-201ENST00000410365 100 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6-1199P-201ENST00000411249 104 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RPL23AP50-201ENST00000434149 455 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RPEP5-201ENST00000441137 268 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 RNU2-12P-201ENST00000517216 168 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 U6atac.1-201ENST00000616025 117 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 AC138305.3-201ENST00000624988 240 ntBASIC0.82□□□□□ -2.28
CX3CR1P49238 SNORD116-13-201ENST00000384408 92 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 SNORD116-29-201ENST00000384516 83 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 MIR526A1-201ENST00000384897 85 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 MTCYBP4-201ENST00000401524 249 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 RNA5SP511-201ENST00000410487 115 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC063976.4-201ENST00000421971 163 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.81□□□□□ -2.28
CX3CR1P49238 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC092473.1-201ENST00000441098 221 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 UBE2V1P7-201ENST00000446395 340 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 Y_RNA.635-201ENST00000459041 101 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 RNU7-169P-201ENST00000459456 61 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 RNU6-277P-201ENST00000516272 106 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 SNORA20.3-201ENST00000516880 132 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC005899.2-201ENST00000584353 90 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC011476.5-201ENST00000615594 130 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms