Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTND4LP16-201ENST00000440828 295 ntBASIC0.74□□□□□ -2.29
SSR1P43307 SNORD5.1-201ENST00000458800 75 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.74□□□□□ -2.29
SSR1P43307 AC114811.1-201ENST00000507207 168 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC026782.1-201ENST00000512952 449 ntBASIC0.74□□□□□ -2.29
SSR1P43307 Y_RNA.670-201ENST00000516255 105 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC024909.2-201ENST00000553035 286 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC090617.3-201ENST00000573670 475 ntBASIC0.74□□□□□ -2.29
SSR1P43307 MIR5701-3-201ENST00000578890 82 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.74□□□□□ -2.29
SSR1P43307 MIR5701-1-201ENST00000585138 82 ntBASIC0.74□□□□□ -2.29
SSR1P43307 MIR5701-2-201ENST00000615634 82 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC015540.1-201ENST00000615828 501 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AC048344.4-201ENST00000619744 527 ntBASIC0.74□□□□□ -2.29
SSR1P43307 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.74□□□□□ -2.29
SSR1P43307 RNU5F-3P-201ENST00000363767 117 ntBASIC0.73□□□□□ -2.29
SSR1P43307 RNU6-163P-201ENST00000384396 106 ntBASIC0.73□□□□□ -2.29
SSR1P43307 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
SSR1P43307 RNA5SP511-201ENST00000410487 115 ntBASIC0.73□□□□□ -2.29
SSR1P43307 Y_RNA.621-201ENST00000411065 96 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AL035398.1-201ENST00000430869 322 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
SSR1P43307 RNU6-625P-201ENST00000459412 107 ntBASIC0.73□□□□□ -2.29
SSR1P43307 RPL7P42-201ENST00000481005 679 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AC092989.1-201ENST00000481235 277 ntBASIC0.73□□□□□ -2.29
SSR1P43307 MTND5P5-201ENST00000503764 376 ntBASIC0.73□□□□□ -2.29
SSR1P43307 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AC004832.4-201ENST00000608952 331 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AL391903.3-201ENST00000612158 163 ntBASIC0.73□□□□□ -2.29
SSR1P43307 AC104260.1-201ENST00000616660 539 ntBASIC0.73□□□□□ -2.29
SSR1P43307 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.72□□□□□ -2.29
SSR1P43307 RNA5SP432-201ENST00000362480 116 ntBASIC0.72□□□□□ -2.29
SSR1P43307 Y_RNA.450-201ENST00000384198 113 ntBASIC0.72□□□□□ -2.29
SSR1P43307 SNORD115-47-201ENST00000391226 86 ntBASIC0.72□□□□□ -2.29
SSR1P43307 RNA5SP482-201ENST00000391269 118 ntBASIC0.72□□□□□ -2.29
SSR1P43307 MTCYBP4-201ENST00000401524 249 ntBASIC0.72□□□□□ -2.29
SSR1P43307 Y_RNA.594-201ENST00000410373 140 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AL390729.2-201ENST00000416137 156 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.72□□□□□ -2.29
SSR1P43307 AC055872.1-201ENST00000570978 278 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
SSR1P43307 AL357312.1-201ENST00000603879 298 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
SSR1P43307 AC018462.2-201ENST00000605375 395 ntBASIC0.72□□□□□ -2.29
SSR1P43307 MIR1244-1-201ENST00000612829 85 ntBASIC0.72□□□□□ -2.29
SSR1P43307 MIR1244-3-201ENST00000635744 85 ntBASIC0.72□□□□□ -2.29
SSR1P43307 MIR1244-2-201ENST00000636449 85 ntBASIC0.72□□□□□ -2.29
SSR1P43307 MIR1244-4-202ENST00000636813 85 ntBASIC0.72□□□□□ -2.29
SSR1P43307 RNY4P14-201ENST00000363656 96 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU4-24P-201ENST00000364565 139 ntBASIC0.71□□□□□ -2.3
SSR1P43307 Y_RNA.364-201ENST00000365532 101 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU6-1297P-201ENST00000384415 104 ntBASIC0.71□□□□□ -2.3
SSR1P43307 MIR891A-201ENST00000401237 79 ntBASIC0.71□□□□□ -2.3
SSR1P43307 MIR548F5-201ENST00000408421 86 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU6-373P-201ENST00000411247 98 ntBASIC0.71□□□□□ -2.3
SSR1P43307 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.71□□□□□ -2.3
SSR1P43307 AC092423.1-201ENST00000430165 186 ntBASIC0.71□□□□□ -2.3
SSR1P43307 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.71□□□□□ -2.3
SSR1P43307 Y_RNA.638-201ENST00000459374 113 ntBASIC0.71□□□□□ -2.3
SSR1P43307 AC093534.1-201ENST00000504977 132 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU7-41P-201ENST00000515917 61 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU6-120P-201ENST00000516077 103 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU6-1278P-201ENST00000516130 107 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
SSR1P43307 RNU7-28P-201ENST00000516759 62 ntBASIC0.71□□□□□ -2.3
SSR1P43307 AC120024.3-201ENST00000603167 156 ntBASIC0.71□□□□□ -2.3
SSR1P43307 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.7□□□□□ -2.3
SSR1P43307 Y_RNA.172-201ENST00000363765 102 ntBASIC0.7□□□□□ -2.3
SSR1P43307 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
SSR1P43307 MIR873-201ENST00000401120 77 ntBASIC0.7□□□□□ -2.3
SSR1P43307 AL354751.2-201ENST00000415471 210 ntBASIC0.7□□□□□ -2.3
SSR1P43307 RPS20P10-201ENST00000451209 253 ntBASIC0.7□□□□□ -2.3
SSR1P43307 RNU7-90P-201ENST00000459216 62 ntBASIC0.7□□□□□ -2.3
SSR1P43307 SNORA40.9-201ENST00000515895 93 ntBASIC0.7□□□□□ -2.3
SSR1P43307 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.7□□□□□ -2.3
SSR1P43307 uc_338.17-201ENST00000619633 179 ntBASIC0.7□□□□□ -2.3
SSR1P43307 MIR3674-201ENST00000636576 68 ntBASIC0.7□□□□□ -2.3
SSR1P43307 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SSR1P43307 Y_RNA.3-201ENST00000362331 103 ntBASIC0.69□□□□□ -2.3
SSR1P43307 Y_RNA.336-201ENST00000365307 109 ntBASIC0.69□□□□□ -2.3
SSR1P43307 Y_RNA.404-201ENST00000383978 102 ntBASIC0.69□□□□□ -2.3
SSR1P43307 MIR200A-201ENST00000384875 90 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AC009161.1-201ENST00000417306 376 ntBASIC0.69□□□□□ -2.3
SSR1P43307 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.69□□□□□ -2.3
SSR1P43307 RPS3AP52-201ENST00000435639 297 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
SSR1P43307 RPL30P15-201ENST00000457129 321 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.69□□□□□ -2.3
SSR1P43307 AC011604.1-201ENST00000545978 196 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.69□□□□□ -2.3
SSR1P43307 AC009229.3-201ENST00000608056 282 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AC093913.1-201ENST00000614178 329 ntBASIC0.69□□□□□ -2.3
SSR1P43307 AL591926.4-201ENST00000616895 298 ntBASIC0.69□□□□□ -2.3
SSR1P43307 Y_RNA.9-201ENST00000362354 101 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNU6-926P-201ENST00000384075 107 ntBASIC0.68□□□□□ -2.3
SSR1P43307 Y_RNA.490-201ENST00000384413 102 ntBASIC0.68□□□□□ -2.3
SSR1P43307 Y_RNA.516-201ENST00000384541 124 ntBASIC0.68□□□□□ -2.3
SSR1P43307 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
SSR1P43307 RNU6-700P-201ENST00000391043 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms