Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 Y_RNA.222-201ENST00000364264 102 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 Y_RNA.286-201ENST00000364813 102 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU6-376P-201ENST00000384731 106 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 MIR548F4-201ENST00000408515 105 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.75□□□□□ -2.13
APOBEC1P41238 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBEC1P41238 HSPE1P25-201ENST00000455484 251 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RPS26P45-201ENST00000471748 340 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 AC098869.1-201ENST00000481627 292 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU1-41P-201ENST00000516161 162 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU1-48P-201ENST00000516400 162 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 RNU7-128P-201ENST00000517247 62 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBEC1P41238 MIR3935-201ENST00000583472 104 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBEC1P41238 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.75□□□□□ -2.13
APOBEC1P41238 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.75□□□□□ -2.13
APOBEC1P41238 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
APOBEC1P41238 AL359851.1-201ENST00000569460 4997 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 snoU2_19.2-201ENST00000363024 80 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 RNU6-290P-201ENST00000365212 101 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
APOBEC1P41238 RNU6-102P-201ENST00000384485 104 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 Y_RNA.569-201ENST00000384749 103 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 Y_RNA.574-201ENST00000384766 95 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
APOBEC1P41238 RPL21P38-201ENST00000418090 167 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 OOSP1P1-201ENST00000423265 274 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.74□□□□□ -2.13
APOBEC1P41238 RNU6-1337P-201ENST00000516525 95 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 MIR514B-201ENST00000516774 80 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 DEFB117-201ENST00000602356 141 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 AC073413.2-201ENST00000604332 360 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
APOBEC1P41238 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 Y_RNA.149-201ENST00000363558 117 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 SNORA63D-201ENST00000364359 132 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 MIR215-201ENST00000384858 110 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 SNORA53-201ENST00000391141 249 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBEC1P41238 AL358176.2-201ENST00000425769 204 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBEC1P41238 MTND4LP30-201ENST00000454092 297 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 RNA5SP481-201ENST00000516814 122 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 AC037487.3-201ENST00000606668 112 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 U6.104-201ENST00000637979 90 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 AC018630.2-201ENST00000534866 2403 ntBASIC1.73□□□□□ -2.13
APOBEC1P41238 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBEC1P41238 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.72□□□□□ -2.13
APOBEC1P41238 RNU6-1309P-201ENST00000363305 108 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 RNU6-1105P-201ENST00000384774 107 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 MIR562-201ENST00000384894 95 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOBEC1P41238 RNU6-855P-201ENST00000410395 104 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.72□□□□□ -2.13
APOBEC1P41238 HMGN1P10-201ENST00000474557 553 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.72□□□□□ -2.13
APOBEC1P41238 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
APOBEC1P41238 MIR3145-201ENST00000580727 82 ntBASIC1.72□□□□□ -2.13
APOBEC1P41238 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
APOBEC1P41238 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
APOBEC1P41238 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APOBEC1P41238 Y_RNA.47-201ENST00000362697 108 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 SNORD114-1-201ENST00000362705 72 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 Y_RNA.84-201ENST00000363011 104 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 Y_RNA.136-201ENST00000363444 102 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 Y_RNA.341-201ENST00000365341 102 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.71□□□□□ -2.14
APOBEC1P41238 Y_RNA.541-201ENST00000384640 113 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 RNU6-950P-201ENST00000384651 107 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 SUMO2P12-201ENST00000405924 140 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 RPL36AP21-201ENST00000490372 323 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 RNU6-63P-201ENST00000516690 95 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 AL627230.6-201ENST00000611129 280 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 MIR8062-201ENST00000621515 85 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBEC1P41238 MIR6079-201ENST00000635807 62 ntBASIC1.71□□□□□ -2.14
APOBEC1P41238 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBEC1P41238 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBEC1P41238 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
APOBEC1P41238 RNU4-13P-201ENST00000364019 141 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 RNU6-326P-201ENST00000365480 107 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 Y_RNA.456-201ENST00000384232 111 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 Y_RNA.512-201ENST00000384518 102 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 MIR520G-201ENST00000385064 90 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 RNA5SP109-201ENST00000391010 116 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 MIR1302-6-201ENST00000408466 90 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms