Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
RFC3P40938 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.56□□□□□ -2.32
RFC3P40938 Y_RNA.688-201ENST00000516565 95 ntBASIC0.56□□□□□ -2.32
RFC3P40938 Y_RNA.706-201ENST00000516933 99 ntBASIC0.56□□□□□ -2.32
RFC3P40938 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.56□□□□□ -2.32
RFC3P40938 AC090617.3-201ENST00000573670 475 ntBASIC0.56□□□□□ -2.32
RFC3P40938 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
RFC3P40938 AC100812.1-201ENST00000607622 580 ntBASIC0.56□□□□□ -2.32
RFC3P40938 AC027279.3-201ENST00000625055 122 ntBASIC0.56□□□□□ -2.32
RFC3P40938 AC073544.1-201ENST00000600110 1595 ntBASIC0.56□□□□□ -2.32
RFC3P40938 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RFC3P40938 RNU6-222P-201ENST00000362438 107 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNU4-41P-201ENST00000364426 143 ntBASIC0.55□□□□□ -2.32
RFC3P40938 Y_RNA.393-201ENST00000383936 102 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNU6-306P-201ENST00000384617 107 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNU6-332P-201ENST00000391193 108 ntBASIC0.55□□□□□ -2.32
RFC3P40938 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.55□□□□□ -2.32
RFC3P40938 UQCRBP2-201ENST00000447827 297 ntBASIC0.55□□□□□ -2.32
RFC3P40938 CYCTP-201ENST00000504253 315 ntBASIC0.55□□□□□ -2.32
RFC3P40938 AC113410.1-201ENST00000505029 247 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
RFC3P40938 RNU6-1116P-201ENST00000517269 99 ntBASIC0.55□□□□□ -2.32
RFC3P40938 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.55□□□□□ -2.32
RFC3P40938 MIR1321-201ENST00000637766 79 ntBASIC0.55□□□□□ -2.32
RFC3P40938 AC023934.1-201ENST00000574529 2389 ntBASIC0.54□□□□□ -2.32
RFC3P40938 MIR410-201ENST00000362222 80 ntBASIC0.54□□□□□ -2.32
RFC3P40938 Y_RNA.38-201ENST00000362617 102 ntBASIC0.54□□□□□ -2.32
RFC3P40938 RNA5SP264-201ENST00000363115 107 ntBASIC0.54□□□□□ -2.32
RFC3P40938 Y_RNA.106-201ENST00000363189 100 ntBASIC0.54□□□□□ -2.32
RFC3P40938 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
RFC3P40938 MIR329-1-201ENST00000385028 80 ntBASIC0.54□□□□□ -2.32
RFC3P40938 MIR873-201ENST00000401120 77 ntBASIC0.54□□□□□ -2.32
RFC3P40938 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
RFC3P40938 RNU6-1001P-201ENST00000411265 100 ntBASIC0.54□□□□□ -2.32
RFC3P40938 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.54□□□□□ -2.32
RFC3P40938 AC093019.1-201ENST00000443135 252 ntBASIC0.54□□□□□ -2.32
RFC3P40938 AC125232.2-201ENST00000592457 143 ntBASIC0.54□□□□□ -2.32
RFC3P40938 AC005828.6-201ENST00000606610 232 ntBASIC0.54□□□□□ -2.32
RFC3P40938 AC127459.3-201ENST00000624328 466 ntBASIC0.54□□□□□ -2.32
RFC3P40938 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
RFC3P40938 RNU6-1145P-201ENST00000384246 107 ntBASIC0.53□□□□□ -2.32
RFC3P40938 EIF1P2-201ENST00000428233 350 ntBASIC0.53□□□□□ -2.32
RFC3P40938 SUMO1P2-201ENST00000452524 304 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC233266.1-201ENST00000454518 96 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC098869.1-201ENST00000481627 292 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC074133.1-201ENST00000515696 183 ntBASIC0.53□□□□□ -2.32
RFC3P40938 RNU6-1096P-201ENST00000517089 102 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AP003716.2-201ENST00000528260 108 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.53□□□□□ -2.32
RFC3P40938 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
RFC3P40938 RN7SL793P-201ENST00000583259 296 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC120024.3-201ENST00000603167 156 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC242852.1-201ENST00000612151 96 ntBASIC0.53□□□□□ -2.32
RFC3P40938 MIR6779-201ENST00000617283 64 ntBASIC0.53□□□□□ -2.32
RFC3P40938 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AC244015.1-201ENST00000622301 99 ntBASIC0.53□□□□□ -2.32
RFC3P40938 AL008636.1-201ENST00000625038 1018 ntBASIC0.53□□□□□ -2.32
RFC3P40938 U6.115-201ENST00000636045 103 ntBASIC0.53□□□□□ -2.32
RFC3P40938 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.53□□□□□ -2.32
RFC3P40938 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.52□□□□□ -2.33
RFC3P40938 SNORD114-7-201ENST00000362520 77 ntBASIC0.52□□□□□ -2.33
RFC3P40938 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
RFC3P40938 RNU6-163P-201ENST00000384396 106 ntBASIC0.52□□□□□ -2.33
RFC3P40938 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
RFC3P40938 U7.7-201ENST00000459276 60 ntBASIC0.52□□□□□ -2.33
RFC3P40938 AC092989.1-201ENST00000481235 277 ntBASIC0.52□□□□□ -2.33
RFC3P40938 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.52□□□□□ -2.33
RFC3P40938 MIR3942-201ENST00000585264 109 ntBASIC0.52□□□□□ -2.33
RFC3P40938 AL357075.2-201ENST00000614906 189 ntBASIC0.52□□□□□ -2.33
RFC3P40938 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
RFC3P40938 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.52□□□□□ -2.33
RFC3P40938 MTND5P16-201ENST00000460269 1703 ntBASIC0.52□□□□□ -2.33
RFC3P40938 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
RFC3P40938 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
RFC3P40938 MIR452-201ENST00000385020 85 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.51□□□□□ -2.33
RFC3P40938 MTND1P1-201ENST00000445453 368 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.51□□□□□ -2.33
RFC3P40938 AC131055.1-201ENST00000584626 316 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AC011712.1-201ENST00000588959 234 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AL512605.2-201ENST00000592972 256 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AC007014.2-201ENST00000615581 479 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AC104260.1-201ENST00000616660 539 ntBASIC0.51□□□□□ -2.33
RFC3P40938 SEPT14P17-201ENST00000617978 177 ntBASIC0.51□□□□□ -2.33
RFC3P40938 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
RFC3P40938 MIR103A2-201ENST00000362154 78 ntBASIC0.5□□□□□ -2.33
RFC3P40938 Y_RNA.205-201ENST00000364128 113 ntBASIC0.5□□□□□ -2.33
RFC3P40938 RNU6-1335P-201ENST00000365426 107 ntBASIC0.5□□□□□ -2.33
RFC3P40938 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
RFC3P40938 RNU2-16P-201ENST00000410712 136 ntBASIC0.5□□□□□ -2.33
RFC3P40938 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
RFC3P40938 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.5□□□□□ -2.33
RFC3P40938 PCNPP5-201ENST00000452246 481 ntBASIC0.5□□□□□ -2.33
RFC3P40938 RNU6-864P-201ENST00000516256 108 ntBASIC0.5□□□□□ -2.33
RFC3P40938 AC018448.1-201ENST00000552843 316 ntBASIC0.5□□□□□ -2.33
RFC3P40938 MIR5701-3-201ENST00000578890 82 ntBASIC0.5□□□□□ -2.33
RFC3P40938 MIR5701-1-201ENST00000585138 82 ntBASIC0.5□□□□□ -2.33
RFC3P40938 AC093913.1-201ENST00000614178 329 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms