Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MTCO2P11-201ENST00000431069 680 ntBASIC-1.16□□□□□ -2.6
SNCAP37840 AC074198.2-201ENST00000508153 258 ntBASIC-1.16□□□□□ -2.6
SNCAP37840 LRRC34P1-201ENST00000542742 915 ntBASIC-1.16□□□□□ -2.6
SNCAP37840 FGF7P1-201ENST00000582820 288 ntBASIC-1.16□□□□□ -2.6
SNCAP37840 SNORD87-201ENST00000364849 89 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.17□□□□□ -2.6
SNCAP37840 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.17□□□□□ -2.6
SNCAP37840 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.17□□□□□ -2.6
SNCAP37840 RNU6-135P-201ENST00000516769 101 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 AP003168.1-201ENST00000530091 307 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.17□□□□□ -2.6
SNCAP37840 AP001330.5-201ENST00000607176 411 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 U7.6-201ENST00000610841 64 ntBASIC-1.17□□□□□ -2.6
SNCAP37840 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.18□□□□□ -2.6
SNCAP37840 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.18□□□□□ -2.6
SNCAP37840 AL358934.1-201ENST00000432346 324 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.18□□□□□ -2.6
SNCAP37840 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.18□□□□□ -2.6
SNCAP37840 AC116353.2-201ENST00000505332 712 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 AC010598.1-201ENST00000510378 103 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 MTND1P5-201ENST00000517906 940 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.18□□□□□ -2.6
SNCAP37840 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.18□□□□□ -2.6
SNCAP37840 U8.6-201ENST00000364939 135 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 RNU6-61P-201ENST00000365528 109 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 SNORA40.2-201ENST00000390847 128 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 SNRPGP10-201ENST00000432323 225 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 RPL23AP75-201ENST00000491601 451 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 AC090572.1-201ENST00000519251 160 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 AP001328.1-201ENST00000528550 176 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.19□□□□□ -2.6
SNCAP37840 SNORD11B-201ENST00000607707 90 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 AC068880.4-201ENST00000623082 495 ntBASIC-1.19□□□□□ -2.6
SNCAP37840 SNORA1-201ENST00000384107 130 ntBASIC-1.2□□□□□ -2.6
SNCAP37840 SNORA51.10-201ENST00000384418 136 ntBASIC-1.2□□□□□ -2.6
SNCAP37840 MIR487A-201ENST00000385009 80 ntBASIC-1.2□□□□□ -2.6
SNCAP37840 RNU6-298P-201ENST00000390888 96 ntBASIC-1.2□□□□□ -2.6
SNCAP37840 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.2□□□□□ -2.6
SNCAP37840 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.2□□□□□ -2.6
SNCAP37840 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.2□□□□□ -2.6
SNCAP37840 RNU6-201P-201ENST00000517100 61 ntBASIC-1.2□□□□□ -2.6
SNCAP37840 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.2□□□□□ -2.6
SNCAP37840 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.2□□□□□ -2.6
SNCAP37840 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.21□□□□□ -2.6
SNCAP37840 SNORD56.2-201ENST00000363242 71 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 SNORD95.1-201ENST00000364099 68 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 RNA5SP368-201ENST00000364298 116 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 RNU6-740P-201ENST00000364734 105 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 RNU6-609P-201ENST00000365459 107 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 MIR320B2-201ENST00000408479 138 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 RNA5SP494-201ENST00000410653 129 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 AC092447.3-201ENST00000426027 686 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.21□□□□□ -2.6
SNCAP37840 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.21□□□□□ -2.6
SNCAP37840 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.21□□□□□ -2.6
SNCAP37840 MIR3118-1-201ENST00000581787 76 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 AC069431.2-201ENST00000604149 1099 ntBASIC-1.21□□□□□ -2.6
SNCAP37840 SNORA63C-201ENST00000364578 129 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 SNORA22B-201ENST00000383876 138 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-39P-201ENST00000384344 107 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-376P-201ENST00000384731 106 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 SNORA75.4-201ENST00000391278 119 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-387P-201ENST00000411331 105 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 MTND2P30-201ENST00000456663 382 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.22□□□□□ -2.6
SNCAP37840 SCARNA17-201ENST00000516183 144 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 SNORD45.4-201ENST00000516629 73 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 AC105029.1-201ENST00000520250 669 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.22□□□□□ -2.6
SNCAP37840 AC087685.1-201ENST00000587507 141 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-88P-201ENST00000606801 100 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 AC022306.2-201ENST00000617563 647 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 AC084368.1-201ENST00000620935 65 ntBASIC-1.22□□□□□ -2.6
SNCAP37840 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 RNU6-117P-201ENST00000365415 107 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.23□□□□□ -2.61
SNCAP37840 AL138752.1-201ENST00000452964 351 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 RNU6-881P-201ENST00000516813 102 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 AL157687.1-201ENST00000554853 619 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 AC010205.1-201ENST00000616668 449 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 AC005609.4-201ENST00000625071 447 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.23□□□□□ -2.61
SNCAP37840 AC093726.3-201ENST00000637588 150 ntBASIC-1.23□□□□□ -2.61
SNCAP37840 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 RNU6-726P-201ENST00000364680 107 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 RNU6-47P-201ENST00000383866 107 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 SNORA20B-201ENST00000384220 132 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 MTCO2P6-201ENST00000463134 685 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 AC093303.1-201ENST00000514549 295 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.24□□□□□ -2.61
SNCAP37840 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms