Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 Y_RNA.148-201ENST00000363557 117 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 Y_RNA.570-201ENST00000384750 101 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 SNORA12.1-201ENST00000390873 148 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 RNA5SP475-201ENST00000410568 110 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGCLP35914 Y_RNA.631-201ENST00000459607 101 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 RNU6-966P-201ENST00000516479 104 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 RNU6-107P-201ENST00000516643 102 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 RNU1-142P-201ENST00000516682 145 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 Y_RNA.711-201ENST00000516993 102 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 RN7SKP295-201ENST00000517264 153 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGCLP35914 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGCLP35914 AC020661.2-201ENST00000560114 134 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGCLP35914 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGCLP35914 AC091178.2-201ENST00000584401 117 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 MIR4438-201ENST00000585271 93 ntBASIC1.35□□□□□ -2.19
HMGCLP35914 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMGCLP35914 RNU6-626P-201ENST00000363354 107 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 Y_RNA.138-201ENST00000363462 102 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 RNU6-271P-201ENST00000363858 105 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 RNU6-20P-201ENST00000384106 107 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 Y_RNA.485-201ENST00000384395 102 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 Y_RNA.526-201ENST00000384572 110 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 MIR628-201ENST00000385229 95 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 AL354751.2-201ENST00000415471 210 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 AC005002.2-201ENST00000438228 269 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 HSPE1P13-201ENST00000451143 297 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 RPS26P55-201ENST00000471178 356 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGCLP35914 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 AC025465.3-201ENST00000510570 311 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 Y_RNA.661-201ENST00000516003 99 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 SNORA31.10-201ENST00000516482 106 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
HMGCLP35914 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGCLP35914 AC005592.1-201ENST00000566527 1640 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RPL21P1-201ENST00000399532 476 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNU5A-5P-201ENST00000411054 116 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNU2-61P-201ENST00000411069 191 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNU6-130P-201ENST00000411112 103 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
HMGCLP35914 RPEP5-201ENST00000441137 268 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 SNORA25.10-201ENST00000515926 124 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 RNA5SP20-201ENST00000515976 84 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGCLP35914 AC006157.1-201ENST00000611750 366 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 AC011476.5-201ENST00000615594 130 ntBASIC1.33□□□□□ -2.2
HMGCLP35914 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGCLP35914 AC018630.2-201ENST00000534866 2403 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC091812.1-201ENST00000432235 1948 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 SNORA4.2-201ENST00000365313 147 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 Y_RNA.445-201ENST00000384168 102 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 Y_RNA.551-201ENST00000384661 102 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCLP35914 FTH1P12-201ENST00000432137 551 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC073910.1-201ENST00000445047 438 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 RNU7-94P-201ENST00000459576 63 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 RNU6-436P-201ENST00000516171 114 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC022616.4-201ENST00000522985 181 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC040926.1-201ENST00000530195 238 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC005176.2-201ENST00000596933 147 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AC104695.3-201ENST00000604052 296 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 AL021879.1-201ENST00000611756 288 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 PART1_1.1-201ENST00000611761 217 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.32□□□□□ -2.2
HMGCLP35914 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGCLP35914 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HMGCLP35914 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGCLP35914 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HMGCLP35914 Y_RNA.11-201ENST00000362375 109 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 Y_RNA.124-201ENST00000363339 93 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 RNU4-50P-201ENST00000364361 141 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 SNORA63.7-201ENST00000365579 123 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 RNU6-926P-201ENST00000384075 107 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 Y_RNA.446-201ENST00000384178 104 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 RNA5SP109-201ENST00000391010 116 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 MIR548P-201ENST00000408336 84 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 AL390729.2-201ENST00000416137 156 ntBASIC1.31□□□□□ -2.2
HMGCLP35914 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms