Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MIR410-201ENST00000362222 80 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORD1A-201ENST00000364968 72 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 Y_RNA.498-201ENST00000384460 102 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORA69.1-201ENST00000390904 137 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXA9P31269 AC114482.1-201ENST00000418010 247 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MTND4P28-201ENST00000426217 387 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
HOXA9P31269 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXA9P31269 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AC010469.2-201ENST00000496412 480 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AC010598.1-201ENST00000510378 103 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORA40.9-201ENST00000515895 93 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 RNU7-99P-201ENST00000516271 62 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 RNU6-264P-201ENST00000517134 104 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXA9P31269 AL355375.2-201ENST00000574825 175 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AL078604.3-201ENST00000615580 211 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 AC138305.3-201ENST00000624988 240 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MIR1302-1-201ENST00000637932 143 ntBASIC1.08□□□□□ -2.24
HOXA9P31269 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXA9P31269 RNU6-1266P-201ENST00000362794 105 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 RNU6-961P-201ENST00000363893 105 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 RNU6-1297P-201ENST00000384415 104 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 Y_RNA.529-201ENST00000384586 119 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HOXA9P31269 RNY4P36-201ENST00000391116 96 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 MTCYBP4-201ENST00000401524 249 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 SNORD12B-201ENST00000410433 91 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 RAB28P5-201ENST00000427490 651 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 FTH1P12-201ENST00000432137 551 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 CHEK2P4-201ENST00000450340 246 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 Y_RNA.632-201ENST00000459189 102 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 RNU7-169P-201ENST00000459456 61 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AC055872.1-201ENST00000570978 278 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AC015688.6-201ENST00000577737 104 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 MIR4438-201ENST00000585271 93 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AL929325.1-201ENST00000603096 117 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AL390123.1-201ENST00000603216 237 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXA9P31269 AC084781.2-201ENST00000615568 161 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 U6.115-201ENST00000636045 103 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 AC073544.1-201ENST00000600110 1595 ntBASIC1.07□□□□□ -2.24
HOXA9P31269 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HOXA9P31269 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 MIR625-201ENST00000385047 85 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.06□□□□□ -2.24
HOXA9P31269 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXA9P31269 MRPS10P1-201ENST00000448483 130 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 RNU6-625P-201ENST00000459412 107 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 RPS27P22-201ENST00000478056 241 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 RNU6-699P-201ENST00000517081 110 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 MIR2355-201ENST00000517199 87 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.06□□□□□ -2.24
HOXA9P31269 AC093027.1-201ENST00000546698 429 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 MIR4709-201ENST00000577272 72 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 MIR3937-201ENST00000580135 106 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 AC005828.6-201ENST00000606610 232 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 MIR8054-201ENST00000620877 86 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 AC006435.5-201ENST00000624486 112 ntBASIC1.06□□□□□ -2.24
HOXA9P31269 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HOXA9P31269 RNU6-490P-201ENST00000362985 107 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 Y_RNA.259-201ENST00000364619 101 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RNU6-708P-201ENST00000384217 107 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RNU6-1031P-201ENST00000384773 107 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 MIR613-201ENST00000385248 95 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RNU6-440P-201ENST00000390882 105 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 COX6CP10-201ENST00000416832 224 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 AF228730.4-201ENST00000421457 183 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RPS27P16-201ENST00000425758 201 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 AC096644.2-201ENST00000429278 159 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 MTND5P20-201ENST00000448677 143 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RNU7-152P-201ENST00000458982 64 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 RNU6-408P-201ENST00000515910 100 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXA9P31269 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXA9P31269 MIR548S-201ENST00000581352 82 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 AC021506.2-201ENST00000612354 169 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.05□□□□□ -2.24
HOXA9P31269 MIR3674-201ENST00000636576 68 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 AC112487.2-201ENST00000637950 304 ntBASIC1.05□□□□□ -2.24
HOXA9P31269 SNORA27.1-201ENST00000362604 124 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.58-201ENST00000362807 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.154-201ENST00000363624 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.243-201ENST00000364481 109 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.263-201ENST00000364659 114 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 RNY3P1-201ENST00000365085 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 RNY3-201ENST00000365484 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.384-201ENST00000383909 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 RNU6-926P-201ENST00000384075 107 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 Y_RNA.463-201ENST00000384271 102 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 MRPL42P3-201ENST00000401492 326 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms