Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-117P-201ENST00000365415 107 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 RNU6-1215P-201ENST00000384441 102 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DPA1P20036 SUMO1P2-201ENST00000452524 304 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 SNORA40.9-201ENST00000515895 93 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 RNU6-1096P-201ENST00000517089 102 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 AL358944.1-201ENST00000528537 144 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DPA1P20036 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DPA1P20036 AC068790.6-201ENST00000602558 258 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 AC005828.6-201ENST00000606610 232 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 AC009229.3-201ENST00000608056 282 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DPA1P20036 RNU6-1080P-201ENST00000383982 107 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 RNU6-318P-201ENST00000384283 103 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 RNU6-601P-201ENST00000384540 107 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 MIR499A-201ENST00000384903 122 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 MIR891A-201ENST00000401237 79 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 POLR2J4-204ENST00000418424 324 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 RNU6-718P-201ENST00000516166 105 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 RNU6-1116P-201ENST00000517269 99 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DPA1P20036 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
HLA-DPA1P20036 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DPA1P20036 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HLA-DPA1P20036 RNU1-36P-201ENST00000365130 165 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 RNU6-1310P-201ENST00000384153 107 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 MIR548F1-201ENST00000408667 84 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 RNA5SP247-201ENST00000411181 105 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 MTND3P8-201ENST00000412909 339 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 AC107399.1-201ENST00000451226 265 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 RPL7P42-201ENST00000481005 679 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 PDCD5P2-201ENST00000507570 312 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 RNU6-63P-201ENST00000516690 95 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DPA1P20036 MIR6504-201ENST00000613520 61 ntBASIC0.98□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.226-201ENST00000364337 114 ntBASIC0.97□□□□□ -2.25
HLA-DPA1P20036 AC114482.1-201ENST00000418010 247 ntBASIC0.97□□□□□ -2.25
HLA-DPA1P20036 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DPA1P20036 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DPA1P20036 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
HLA-DPA1P20036 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.97□□□□□ -2.25
HLA-DPA1P20036 AC005899.2-201ENST00000584353 90 ntBASIC0.97□□□□□ -2.25
HLA-DPA1P20036 PISRT1.1-201ENST00000616930 107 ntBASIC0.97□□□□□ -2.25
HLA-DPA1P20036 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DPA1P20036 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 SNORD114-7-201ENST00000362520 77 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 RNU6-833P-201ENST00000363486 107 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.243-201ENST00000364481 109 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 RNU6-969P-201ENST00000383900 105 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.482-201ENST00000384377 111 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 RNU6-163P-201ENST00000384396 106 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 MIR1277-201ENST00000408536 78 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 RPL23AP50-201ENST00000434149 455 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 MTND3P10-201ENST00000450967 341 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 AF235103.2-201ENST00000525753 346 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 AC004832.4-201ENST00000608952 331 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DPA1P20036 AC002553.4-201ENST00000616896 331 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 AC092794.2-201ENST00000620933 563 ntBASIC0.96□□□□□ -2.26
HLA-DPA1P20036 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 SNORD116-4-201ENST00000384733 96 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 MIR526A1-201ENST00000384897 85 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 SNORD12B-201ENST00000410433 91 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DPA1P20036 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DPA1P20036 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DPA1P20036 CYCTP-201ENST00000504253 315 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 SNORD111.1-201ENST00000516421 86 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 RNU6-307P-201ENST00000516743 106 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 PRELID3BP2-201ENST00000605362 201 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 AL096861.1-201ENST00000610899 123 ntBASIC0.95□□□□□ -2.26
HLA-DPA1P20036 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DPA1P20036 SNORD68-201ENST00000363214 84 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MIR1287-201ENST00000408492 90 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 Y_RNA.621-201ENST00000411065 96 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 PIGPP3-201ENST00000425307 415 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.94□□□□□ -2.26
HLA-DPA1P20036 RNU7-21P-201ENST00000459430 62 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 RPL17P19-201ENST00000489069 552 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AC090142.3-201ENST00000519012 385 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AC120024.3-201ENST00000603167 156 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 AC136443.5-201ENST00000603741 370 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MIR1244-1-201ENST00000612829 85 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MIR1244-3-201ENST00000635744 85 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MIR1244-2-201ENST00000636449 85 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MIR1244-4-202ENST00000636813 85 ntBASIC0.94□□□□□ -2.26
HLA-DPA1P20036 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HLA-DPA1P20036 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms