Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AL512427.1-201ENST00000618593 349 ntBASIC-1□□□□□ -2.57
HIST1H1DP16402 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-873P-201ENST00000363833 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 SNORD115-8-201ENST00000363856 82 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 SNORA63C-201ENST00000364578 129 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 SNORD115-38-201ENST00000365037 82 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 MIR1912-201ENST00000410389 80 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.01□□□□□ -2.57
HIST1H1DP16402 AC109327.2-201ENST00000448339 378 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU7-62P-201ENST00000458856 62 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 AC112204.1-201ENST00000502591 103 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 RNU6-135P-201ENST00000516769 101 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 MTND2P32-201ENST00000521584 1038 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 MIR5589-201ENST00000579442 60 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 Z94722.1-201ENST00000604328 474 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 AC134878.1-201ENST00000619901 243 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 AC013437.2-201ENST00000639587 677 ntBASIC-1.01□□□□□ -2.57
HIST1H1DP16402 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
HIST1H1DP16402 RNA5SP98-201ENST00000363158 137 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 RNA5SP205-201ENST00000364653 136 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.02□□□□□ -2.57
HIST1H1DP16402 RNU6-393P-201ENST00000384475 107 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 MIR487A-201ENST00000385009 80 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 FCF1P9-201ENST00000412546 282 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 AC018865.2-201ENST00000423631 129 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 AL365184.2-201ENST00000431139 435 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.02□□□□□ -2.57
HIST1H1DP16402 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.02□□□□□ -2.57
HIST1H1DP16402 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 RMST_3.1-201ENST00000611651 109 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 uc_338.4-201ENST00000616635 176 ntBASIC-1.02□□□□□ -2.57
HIST1H1DP16402 AC010332.2-201ENST00000613083 1904 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 RNU6-809P-201ENST00000384461 107 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 SNORA3B-201ENST00000391305 131 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 RNU6-735P-201ENST00000410612 107 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AL359672.1-201ENST00000442302 409 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 HMGN2P32-201ENST00000444648 269 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.03□□□□□ -2.57
HIST1H1DP16402 RNU7-185P-201ENST00000459215 60 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC010424.1-201ENST00000506336 297 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.03□□□□□ -2.57
HIST1H1DP16402 RNU2-12P-201ENST00000517216 168 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.03□□□□□ -2.57
HIST1H1DP16402 MIR3684-201ENST00000579779 74 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 MIR4677-201ENST00000584153 80 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 U6.114-201ENST00000636407 96 ntBASIC-1.03□□□□□ -2.57
HIST1H1DP16402 SNORD114-14-201ENST00000362723 75 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 SNORA20B-201ENST00000384220 132 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 MTCO3P40-201ENST00000392516 676 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 MIR873-201ENST00000401120 77 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 MIR1257-201ENST00000408490 117 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.04□□□□□ -2.58
HIST1H1DP16402 AC091959.1-201ENST00000495857 238 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 AC091885.1-201ENST00000506658 268 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 RNA5SP20-201ENST00000515976 84 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 AC121247.2-201ENST00000604776 136 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 SNORA70.25-201ENST00000612741 95 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 MIR6507-201ENST00000613630 70 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 Pinc.1-201ENST00000616452 154 ntBASIC-1.04□□□□□ -2.58
HIST1H1DP16402 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.04□□□□□ -2.58
HIST1H1DP16402 RNU6-117P-201ENST00000365415 107 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 SNORA51.10-201ENST00000384418 136 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 MIR625-201ENST00000385047 85 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 SNORA75.1-201ENST00000391130 148 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 AC092447.3-201ENST00000426027 686 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 AL137792.2-201ENST00000443484 235 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 AL359999.1-201ENST00000604513 294 ntBASIC-1.05□□□□□ -2.58
HIST1H1DP16402 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.05□□□□□ -2.58
HIST1H1DP16402 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
HIST1H1DP16402 AC090844.1-201ENST00000422019 156 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.06□□□□□ -2.58
HIST1H1DP16402 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.06□□□□□ -2.58
HIST1H1DP16402 AGGF1P4-201ENST00000568249 801 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 AC125232.2-201ENST00000592457 143 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 MIR6740-201ENST00000618268 113 ntBASIC-1.06□□□□□ -2.58
HIST1H1DP16402 SNORA27.1-201ENST00000362604 124 ntBASIC-1.07□□□□□ -2.58
HIST1H1DP16402 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.07□□□□□ -2.58
HIST1H1DP16402 SNORD28-201ENST00000384706 75 ntBASIC-1.07□□□□□ -2.58
HIST1H1DP16402 MIR604-201ENST00000384880 94 ntBASIC-1.07□□□□□ -2.58
HIST1H1DP16402 MRPL42P2-201ENST00000403169 426 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms