Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.625-201ENST00000411256 107 ntBASIC4.57□□□□□ -1.68
CD44P16070 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.57□□□□□ -1.68
CD44P16070 RNU7-143P-201ENST00000516781 65 ntBASIC4.57□□□□□ -1.68
CD44P16070 AP000867.2-201ENST00000532468 320 ntBASIC4.57□□□□□ -1.68
CD44P16070 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CD44P16070 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.57□□□□□ -1.68
CD44P16070 TNPO1P3-201ENST00000436471 2662 ntBASIC4.57□□□□□ -1.68
CD44P16070 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
CD44P16070 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD44P16070 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CD44P16070 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.56□□□□□ -1.68
CD44P16070 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.56□□□□□ -1.68
CD44P16070 RNU6-546P-201ENST00000383991 107 ntBASIC4.56□□□□□ -1.68
CD44P16070 RNU4-83P-201ENST00000410863 133 ntBASIC4.56□□□□□ -1.68
CD44P16070 AC091390.1-201ENST00000433904 331 ntBASIC4.56□□□□□ -1.68
CD44P16070 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.56□□□□□ -1.68
CD44P16070 AC009220.1-201ENST00000451614 275 ntBASIC4.56□□□□□ -1.68
CD44P16070 TRBV12-1-201ENST00000479785 344 ntBASIC4.56□□□□□ -1.68
CD44P16070 AC024995.1-201ENST00000523014 93 ntBASIC4.56□□□□□ -1.68
CD44P16070 MIR7151-201ENST00000617477 60 ntBASIC4.56□□□□□ -1.68
CD44P16070 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD44P16070 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CD44P16070 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD44P16070 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.56□□□□□ -1.68
CD44P16070 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD44P16070 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD44P16070 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
CD44P16070 snoU13.1-201ENST00000459157 104 ntBASIC4.55□□□□□ -1.68
CD44P16070 RN7SL481P-201ENST00000477764 299 ntBASIC4.55□□□□□ -1.68
CD44P16070 AC104996.3-201ENST00000590718 94 ntBASIC4.55□□□□□ -1.68
CD44P16070 AC008745.1-201ENST00000604064 271 ntBASIC4.55□□□□□ -1.68
CD44P16070 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.55□□□□□ -1.68
CD44P16070 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD44P16070 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CD44P16070 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD44P16070 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CD44P16070 MIR515-2-201ENST00000384883 83 ntBASIC4.54□□□□□ -1.68
CD44P16070 MIR515-1-201ENST00000384884 83 ntBASIC4.54□□□□□ -1.68
CD44P16070 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC4.54□□□□□ -1.68
CD44P16070 AC009969.1-201ENST00000438726 172 ntBASIC4.54□□□□□ -1.68
CD44P16070 RNA5SP246-201ENST00000458909 119 ntBASIC4.54□□□□□ -1.68
CD44P16070 RN7SL459P-201ENST00000481078 302 ntBASIC4.54□□□□□ -1.68
CD44P16070 AC099522.1-202ENST00000514718 367 ntBASIC4.54□□□□□ -1.68
CD44P16070 TVP23BP1-201ENST00000557500 617 ntBASIC4.54□□□□□ -1.68
CD44P16070 MIR3690-201ENST00000580266 75 ntBASIC4.54□□□□□ -1.68
CD44P16070 MIR3064-201ENST00000581130 66 ntBASIC4.54□□□□□ -1.68
CD44P16070 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.54□□□□□ -1.68
CD44P16070 AC027279.3-201ENST00000625055 122 ntBASIC4.54□□□□□ -1.68
CD44P16070 MIR7978-201ENST00000636158 59 ntBASIC4.54□□□□□ -1.68
CD44P16070 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.54□□□□□ -1.68
CD44P16070 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CD44P16070 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD44P16070 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD44P16070 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD44P16070 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.54□□□□□ -1.68
CD44P16070 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.53□□□□□ -1.68
CD44P16070 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CD44P16070 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
CD44P16070 RNA5SP513-201ENST00000364648 118 ntBASIC4.53□□□□□ -1.68
CD44P16070 RNU6-283P-201ENST00000364788 107 ntBASIC4.53□□□□□ -1.68
CD44P16070 RNU6-154P-201ENST00000384306 106 ntBASIC4.53□□□□□ -1.68
CD44P16070 AL357552.1-201ENST00000445254 415 ntBASIC4.53□□□□□ -1.68
CD44P16070 AC023790.1-201ENST00000482174 347 ntBASIC4.53□□□□□ -1.68
CD44P16070 RN7SL297P-201ENST00000483161 293 ntBASIC4.53□□□□□ -1.68
CD44P16070 MIR4536-1-201ENST00000583537 88 ntBASIC4.53□□□□□ -1.68
CD44P16070 MIR6076-201ENST00000617521 113 ntBASIC4.53□□□□□ -1.68
CD44P16070 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD44P16070 AC087190.4-201ENST00000574616 8334 ntBASIC4.53□□□□□ -1.68
CD44P16070 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD44P16070 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD44P16070 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
CD44P16070 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.52□□□□□ -1.69
CD44P16070 RNU6-1019P-201ENST00000364424 107 ntBASIC4.52□□□□□ -1.69
CD44P16070 RNU6-132P-201ENST00000383863 107 ntBASIC4.52□□□□□ -1.69
CD44P16070 SNORD45A-201ENST00000384512 84 ntBASIC4.52□□□□□ -1.69
CD44P16070 SRIP3-201ENST00000413200 219 ntBASIC4.52□□□□□ -1.69
CD44P16070 HMGN1P33-201ENST00000432945 451 ntBASIC4.52□□□□□ -1.69
CD44P16070 RPS29P11-201ENST00000496507 171 ntBASIC4.52□□□□□ -1.69
CD44P16070 Vault.1-201ENST00000516474 102 ntBASIC4.52□□□□□ -1.69
CD44P16070 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC4.52□□□□□ -1.69
CD44P16070 AC114781.5-201ENST00000615297 108 ntBASIC4.52□□□□□ -1.69
CD44P16070 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD44P16070 AC245060.5-201ENST00000610778 3293 ntBASIC4.52□□□□□ -1.69
CD44P16070 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.52□□□□□ -1.69
CD44P16070 MIRLET7C-201ENST00000362160 84 ntBASIC4.51□□□□□ -1.69
CD44P16070 RNA5SP366-201ENST00000365454 123 ntBASIC4.51□□□□□ -1.69
CD44P16070 Y_RNA.491-201ENST00000384417 107 ntBASIC4.51□□□□□ -1.69
CD44P16070 RNU6-808P-201ENST00000391233 108 ntBASIC4.51□□□□□ -1.69
CD44P16070 HSPE1P26-201ENST00000405341 275 ntBASIC4.51□□□□□ -1.69
CD44P16070 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.51□□□□□ -1.69
CD44P16070 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.51□□□□□ -1.69
CD44P16070 AP000753.3-201ENST00000604083 169 ntBASIC4.51□□□□□ -1.69
CD44P16070 AL356218.2-201ENST00000605264 187 ntBASIC4.51□□□□□ -1.69
CD44P16070 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.51□□□□□ -1.69
CD44P16070 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.51□□□□□ -1.69
CD44P16070 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.51□□□□□ -1.69
CD44P16070 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CD44P16070 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CD44P16070 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CD44P16070 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms