Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AL500527.2-201ENST00000454105 95 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 AC104563.1-201ENST00000476147 376 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 SUMO2P5-201ENST00000506790 245 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 SNORA18.4-201ENST00000516440 124 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 AC091135.1-201ENST00000585943 307 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 ZNF299P-201ENST00000406845 1804 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR507-201ENST00000385234 94 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-205P-201ENST00000390858 107 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU2-54P-201ENST00000410299 190 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 AC010975.2-201ENST00000427781 588 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-63P-201ENST00000516690 95 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 SNORA1B-201ENST00000362535 133 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 SNORD45.3-201ENST00000363836 72 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNY4P10-201ENST00000365571 96 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR215-201ENST00000384858 110 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 RPL23AP75-201ENST00000491601 451 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 SNORA43.2-201ENST00000516652 128 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC121247.2-201ENST00000604776 136 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
COL6A3P12111 MIRLET7C-201ENST00000362160 84 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 SNORA36A-201ENST00000384221 132 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR578-201ENST00000384828 96 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR562-201ENST00000384894 95 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR15B-201ENST00000385045 98 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.49□□□□□ -2.49
COL6A3P12111 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 AC079395.1-201ENST00000510981 262 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC010486.3-201ENST00000511602 785 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-58P-201ENST00000517143 103 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC020661.2-201ENST00000560114 134 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.49□□□□□ -2.49
COL6A3P12111 VN1R87P-201ENST00000596706 487 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC020891.4-201ENST00000605745 93 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR7107-201ENST00000611489 80 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 AC244669.1-204ENST00000621564 178 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 SCARNA4-201ENST00000629045 128 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 MIR4251-201ENST00000635819 61 ntBASIC-0.49□□□□□ -2.49
COL6A3P12111 RNU6-580P-201ENST00000365159 107 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 SNORD14.1-201ENST00000365609 90 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 MT-TN-201ENST00000387400 73 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 MIR1257-201ENST00000408490 117 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNU2-42P-201ENST00000410697 113 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A3P12111 POLR2KP2-201ENST00000438155 177 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A3P12111 RNU6-850P-201ENST00000516934 103 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.5□□□□□ -2.49
COL6A3P12111 MIR4752-201ENST00000579672 72 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AP002802.2-201ENST00000605877 235 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 U7.6-201ENST00000610841 64 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNU6-490P-201ENST00000362985 107 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNU6-527P-201ENST00000363425 104 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNY1P11-201ENST00000363759 113 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 MIR19A-201ENST00000384878 82 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AC090844.1-201ENST00000422019 156 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 PIGPP3-201ENST00000425307 415 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.5□□□□□ -2.49
COL6A3P12111 AC097462.1-201ENST00000514125 324 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNU7-28P-201ENST00000516759 62 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 RNA5SP169-201ENST00000517268 117 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 DEFB108A-201ENST00000530110 222 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.5□□□□□ -2.49
COL6A3P12111 AC133794.1-201ENST00000602731 914 ntBASIC-0.5□□□□□ -2.49
COL6A3P12111 AC117470.1-201ENST00000381974 330 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-376P-201ENST00000384731 106 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 SNORD110-201ENST00000408189 75 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AL390729.2-201ENST00000416137 156 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A3P12111 AC091951.3-201ENST00000504093 246 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU7-128P-201ENST00000517247 62 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.51□□□□□ -2.49
COL6A3P12111 MTND4P33-201ENST00000556706 766 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC010975.3-201ENST00000618727 978 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AL136221.1-201ENST00000621449 509 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC138649.3-201ENST00000622154 254 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC005609.4-201ENST00000625071 447 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.51□□□□□ -2.49
COL6A3P12111 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AC013470.1-201ENST00000453438 462 ntBASIC-0.51□□□□□ -2.49
COL6A3P12111 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.51□□□□□ -2.49
COL6A3P12111 snoU13.2-201ENST00000459201 104 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms