Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
PCNAP12004 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
PCNAP12004 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
PCNAP12004 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
PCNAP12004 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 AL359075.3-201ENST00000613288 217 ntBASIC1.9□□□□□ -2.11
PCNAP12004 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 AC006435.5-201ENST00000624486 112 ntBASIC1.9□□□□□ -2.11
PCNAP12004 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.9□□□□□ -2.11
PCNAP12004 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.89□□□□□ -2.11
PCNAP12004 RNU4-80P-201ENST00000363200 141 ntBASIC1.89□□□□□ -2.11
PCNAP12004 Y_RNA.376-201ENST00000365638 108 ntBASIC1.89□□□□□ -2.11
PCNAP12004 Y_RNA.418-201ENST00000384029 102 ntBASIC1.89□□□□□ -2.11
PCNAP12004 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
PCNAP12004 RNU2-61P-201ENST00000411069 191 ntBASIC1.89□□□□□ -2.11
PCNAP12004 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
PCNAP12004 HMGN1P10-201ENST00000474557 553 ntBASIC1.89□□□□□ -2.11
PCNAP12004 RNU6-1337P-201ENST00000516525 95 ntBASIC1.89□□□□□ -2.11
PCNAP12004 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
PCNAP12004 PRR13P7-201ENST00000605538 430 ntBASIC1.89□□□□□ -2.11
PCNAP12004 RNU4-90P-201ENST00000362773 141 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU6-112P-201ENST00000363599 104 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU6-296P-201ENST00000384608 107 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU6-713P-201ENST00000384761 107 ntBASIC1.88□□□□□ -2.11
PCNAP12004 MT-TW-201ENST00000387382 68 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNA5SP109-201ENST00000391010 116 ntBASIC1.88□□□□□ -2.11
PCNAP12004 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.88□□□□□ -2.11
PCNAP12004 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.88□□□□□ -2.11
PCNAP12004 AL135790.2-201ENST00000437701 267 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU6-1143P-201ENST00000516125 104 ntBASIC1.88□□□□□ -2.11
PCNAP12004 RNU1-142P-201ENST00000516682 145 ntBASIC1.88□□□□□ -2.11
PCNAP12004 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
PCNAP12004 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.88□□□□□ -2.11
PCNAP12004 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
PCNAP12004 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
PCNAP12004 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.88□□□□□ -2.11
PCNAP12004 AC127459.3-201ENST00000624328 466 ntBASIC1.88□□□□□ -2.11
PCNAP12004 ZNF355P-201ENST00000427301 3216 ntBASIC1.88□□□□□ -2.11
PCNAP12004 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
PCNAP12004 Y_RNA.176-201ENST00000363815 109 ntBASIC1.87□□□□□ -2.11
PCNAP12004 RNU6-1019P-201ENST00000364424 107 ntBASIC1.87□□□□□ -2.11
PCNAP12004 RNU6-290P-201ENST00000365212 101 ntBASIC1.87□□□□□ -2.11
PCNAP12004 RNU6-117P-201ENST00000365415 107 ntBASIC1.87□□□□□ -2.11
PCNAP12004 Y_RNA.396-201ENST00000383949 103 ntBASIC1.87□□□□□ -2.11
PCNAP12004 Y_RNA.483-201ENST00000384380 101 ntBASIC1.87□□□□□ -2.11
PCNAP12004 Y_RNA.569-201ENST00000384749 103 ntBASIC1.87□□□□□ -2.11
PCNAP12004 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.87□□□□□ -2.11
PCNAP12004 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
PCNAP12004 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
PCNAP12004 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
PCNAP12004 RPL23AP94-201ENST00000512518 302 ntBASIC1.87□□□□□ -2.11
PCNAP12004 RNU7-99P-201ENST00000516271 62 ntBASIC1.87□□□□□ -2.11
PCNAP12004 SNORA31.17-201ENST00000516953 127 ntBASIC1.87□□□□□ -2.11
PCNAP12004 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.87□□□□□ -2.11
PCNAP12004 MIR8062-201ENST00000621515 85 ntBASIC1.87□□□□□ -2.11
PCNAP12004 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PCNAP12004 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
PCNAP12004 SNORA4.2-201ENST00000365313 147 ntBASIC1.86□□□□□ -2.11
PCNAP12004 Y_RNA.461-201ENST00000384263 103 ntBASIC1.86□□□□□ -2.11
PCNAP12004 RNU6-376P-201ENST00000384731 106 ntBASIC1.86□□□□□ -2.11
PCNAP12004 RNU2-2P-201ENST00000410396 191 ntBASIC1.86□□□□□ -2.11
PCNAP12004 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
PCNAP12004 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.86□□□□□ -2.11
PCNAP12004 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PCNAP12004 MTND3P2-201ENST00000438452 342 ntBASIC1.86□□□□□ -2.11
PCNAP12004 SUMO1P2-201ENST00000452524 304 ntBASIC1.86□□□□□ -2.11
PCNAP12004 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.86□□□□□ -2.11
PCNAP12004 SNORA70.12-201ENST00000516084 153 ntBASIC1.86□□□□□ -2.11
PCNAP12004 SCARNA24.2-201ENST00000516968 130 ntBASIC1.86□□□□□ -2.11
PCNAP12004 RPL21P9-201ENST00000556149 474 ntBASIC1.86□□□□□ -2.11
PCNAP12004 AC022217.4-201ENST00000604389 163 ntBASIC1.86□□□□□ -2.11
PCNAP12004 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.86□□□□□ -2.11
PCNAP12004 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
PCNAP12004 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
PCNAP12004 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PCNAP12004 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
PCNAP12004 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PCNAP12004 Y_RNA.149-201ENST00000363558 117 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RNU6-574P-201ENST00000384265 107 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RNU6-472P-201ENST00000384299 107 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MIR515-2-201ENST00000384883 83 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MIR515-1-201ENST00000384884 83 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RNU6-855P-201ENST00000410395 104 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RNA5SP511-201ENST00000410487 115 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RNU6-1203P-201ENST00000410703 110 ntBASIC1.85□□□□□ -2.11
PCNAP12004 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.85□□□□□ -2.11
PCNAP12004 MTCYBP9-201ENST00000431021 303 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MTCO1P5-201ENST00000433573 344 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RPS27P1-201ENST00000450552 247 ntBASIC1.85□□□□□ -2.11
PCNAP12004 AC091021.1-201ENST00000468051 388 ntBASIC1.85□□□□□ -2.11
PCNAP12004 RPS26P45-201ENST00000471748 340 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MTCO2P24-201ENST00000515611 426 ntBASIC1.85□□□□□ -2.11
PCNAP12004 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
PCNAP12004 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
PCNAP12004 AP001282.2-201ENST00000616149 309 ntBASIC1.85□□□□□ -2.11
PCNAP12004 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
PCNAP12004 SNORA63D-201ENST00000364359 132 ntBASIC1.84□□□□□ -2.11
PCNAP12004 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms