Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RNU1-91P-201ENST00000364746 163 ntBASIC2.82□□□□□ -1.96
APPP05067 Y_RNA.368-201ENST00000365547 113 ntBASIC2.82□□□□□ -1.96
APPP05067 COX6CP10-201ENST00000416832 224 ntBASIC2.82□□□□□ -1.96
APPP05067 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.82□□□□□ -1.96
APPP05067 AC104332.1-201ENST00000440471 797 ntBASIC2.82□□□□□ -1.96
APPP05067 AL357134.1-201ENST00000445848 426 ntBASIC2.82□□□□□ -1.96
APPP05067 AC074290.1-201ENST00000448883 135 ntBASIC2.82□□□□□ -1.96
APPP05067 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.82□□□□□ -1.96
APPP05067 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.82□□□□□ -1.96
APPP05067 AC103810.6-201ENST00000606708 136 ntBASIC2.82□□□□□ -1.96
APPP05067 AC073349.3-201ENST00000617616 186 ntBASIC2.82□□□□□ -1.96
APPP05067 AC022513.1-201ENST00000624512 117 ntBASIC2.82□□□□□ -1.96
APPP05067 AC068647.2-201ENST00000637380 353 ntBASIC2.82□□□□□ -1.96
APPP05067 AL159152.1-201ENST00000635019 2587 ntBASIC2.82□□□□□ -1.96
APPP05067 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.81□□□□□ -1.96
APPP05067 MIR21-201ENST00000362134 72 ntBASIC2.81□□□□□ -1.96
APPP05067 RNU1-51P-201ENST00000365345 176 ntBASIC2.81□□□□□ -1.96
APPP05067 MIR548I3-201ENST00000408378 149 ntBASIC2.81□□□□□ -1.96
APPP05067 MIR548I1-201ENST00000408810 149 ntBASIC2.81□□□□□ -1.96
APPP05067 AC011406.1-201ENST00000512440 370 ntBASIC2.81□□□□□ -1.96
APPP05067 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.81□□□□□ -1.96
APPP05067 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.81□□□□□ -1.96
APPP05067 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APPP05067 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
APPP05067 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APPP05067 RNU6-117P-201ENST00000365415 107 ntBASIC2.8□□□□□ -1.96
APPP05067 RNU6-918P-201ENST00000391219 106 ntBASIC2.8□□□□□ -1.96
APPP05067 RNU4-53P-201ENST00000410828 140 ntBASIC2.8□□□□□ -1.96
APPP05067 Y_RNA.793-201ENST00000411222 111 ntBASIC2.8□□□□□ -1.96
APPP05067 BX510359.4-201ENST00000423750 193 ntBASIC2.8□□□□□ -1.96
APPP05067 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.8□□□□□ -1.96
APPP05067 RNA5SP281-201ENST00000516504 135 ntBASIC2.8□□□□□ -1.96
APPP05067 RNU6-861P-201ENST00000516745 106 ntBASIC2.8□□□□□ -1.96
APPP05067 AC087441.2-201ENST00000529141 262 ntBASIC2.8□□□□□ -1.96
APPP05067 CYCSP26-201ENST00000534107 320 ntBASIC2.8□□□□□ -1.96
APPP05067 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.8□□□□□ -1.96
APPP05067 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
APPP05067 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
APPP05067 AC013791.1-201ENST00000616619 62 ntBASIC2.8□□□□□ -1.96
APPP05067 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APPP05067 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APPP05067 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APPP05067 Y_RNA.29-201ENST00000362570 113 ntBASIC2.79□□□□□ -1.96
APPP05067 RNU6-682P-201ENST00000363843 106 ntBASIC2.79□□□□□ -1.96
APPP05067 Y_RNA.304-201ENST00000365011 112 ntBASIC2.79□□□□□ -1.96
APPP05067 RNU6-209P-201ENST00000384118 107 ntBASIC2.79□□□□□ -1.96
APPP05067 Y_RNA.785-201ENST00000384290 109 ntBASIC2.79□□□□□ -1.96
APPP05067 RNU6-1186P-201ENST00000410429 97 ntBASIC2.79□□□□□ -1.96
APPP05067 RNU6-383P-201ENST00000410864 94 ntBASIC2.79□□□□□ -1.96
APPP05067 RPS15AP28-201ENST00000435088 386 ntBASIC2.79□□□□□ -1.96
APPP05067 HSPE1P21-201ENST00000438283 308 ntBASIC2.79□□□□□ -1.96
APPP05067 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
APPP05067 MIR5692C2-201ENST00000577959 77 ntBASIC2.79□□□□□ -1.96
APPP05067 MIR4438-201ENST00000585271 93 ntBASIC2.79□□□□□ -1.96
APPP05067 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.79□□□□□ -1.96
APPP05067 AC012640.5-201ENST00000623897 319 ntBASIC2.79□□□□□ -1.96
APPP05067 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.79□□□□□ -1.96
APPP05067 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APPP05067 RNU1-22P-201ENST00000363334 158 ntBASIC2.78□□□□□ -1.96
APPP05067 RNA5SP493-201ENST00000364115 91 ntBASIC2.78□□□□□ -1.96
APPP05067 PCNPP3-201ENST00000393579 471 ntBASIC2.78□□□□□ -1.96
APPP05067 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.78□□□□□ -1.96
APPP05067 MIR1278-201ENST00000408753 81 ntBASIC2.78□□□□□ -1.96
APPP05067 SRIP3-201ENST00000413200 219 ntBASIC2.78□□□□□ -1.96
APPP05067 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.78□□□□□ -1.96
APPP05067 RNU7-128P-201ENST00000517247 62 ntBASIC2.78□□□□□ -1.96
APPP05067 AP002392.1-201ENST00000537692 208 ntBASIC2.78□□□□□ -1.96
APPP05067 AC015720.1-201ENST00000565251 277 ntBASIC2.78□□□□□ -1.96
APPP05067 U4atac.1-201ENST00000618345 95 ntBASIC2.78□□□□□ -1.96
APPP05067 U6.108-201ENST00000637764 58 ntBASIC2.78□□□□□ -1.96
APPP05067 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.78□□□□□ -1.96
APPP05067 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APPP05067 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
APPP05067 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
APPP05067 snoU2_19.4-201ENST00000364329 80 ntBASIC2.77□□□□□ -1.97
APPP05067 Y_RNA.293-201ENST00000364908 93 ntBASIC2.77□□□□□ -1.97
APPP05067 Y_RNA.456-201ENST00000384232 111 ntBASIC2.77□□□□□ -1.97
APPP05067 MIR597-201ENST00000384968 97 ntBASIC2.77□□□□□ -1.97
APPP05067 AL117342.1-201ENST00000404861 406 ntBASIC2.77□□□□□ -1.97
APPP05067 AC008134.1-201ENST00000420943 193 ntBASIC2.77□□□□□ -1.97
APPP05067 YWHAEP4-201ENST00000505390 198 ntBASIC2.77□□□□□ -1.97
APPP05067 SUMO2P18-201ENST00000518873 252 ntBASIC2.77□□□□□ -1.97
APPP05067 AC100767.1-201ENST00000528178 123 ntBASIC2.77□□□□□ -1.97
APPP05067 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.77□□□□□ -1.97
APPP05067 MIR3169-201ENST00000578032 83 ntBASIC2.77□□□□□ -1.97
APPP05067 AL590808.1-201ENST00000618696 141 ntBASIC2.77□□□□□ -1.97
APPP05067 FTX_2.1-201ENST00000618816 94 ntBASIC2.77□□□□□ -1.97
APPP05067 MIR338-201ENST00000636369 67 ntBASIC2.77□□□□□ -1.97
APPP05067 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
APPP05067 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APPP05067 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
APPP05067 Y_RNA.99-201ENST00000363138 105 ntBASIC2.76□□□□□ -1.97
APPP05067 RNU4-52P-201ENST00000384209 138 ntBASIC2.76□□□□□ -1.97
APPP05067 MIR1253-201ENST00000408273 105 ntBASIC2.76□□□□□ -1.97
APPP05067 RNU6-710P-201ENST00000410424 105 ntBASIC2.76□□□□□ -1.97
APPP05067 AC099677.2-201ENST00000436385 175 ntBASIC2.76□□□□□ -1.97
APPP05067 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.76□□□□□ -1.97
APPP05067 AC097462.1-201ENST00000514125 324 ntBASIC2.76□□□□□ -1.97
APPP05067 SNORA70.12-201ENST00000516084 153 ntBASIC2.76□□□□□ -1.97
APPP05067 RNU6-1219P-201ENST00000516143 112 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms