Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 Y_RNA.279-201ENST00000364763 95 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 MIR873-201ENST00000401120 77 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 RNU5A-5P-201ENST00000411054 116 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 AL049830.1-201ENST00000468034 425 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 AC093852.1-201ENST00000503587 266 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 AC105758.1-201ENST00000506038 399 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 SNORA31.2-201ENST00000516019 134 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 SNORD116-28-201ENST00000516123 91 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 SNORA70.22-201ENST00000517160 124 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 AP002004.2-201ENST00000531656 154 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 snoU13.31-201ENST00000607291 104 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 AC004467.1-201ENST00000615678 330 ntBASIC0.77□□□□□ -2.29
HLA-DQA1P01909 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.77□□□□□ -2.29
HLA-DQA1P01909 RNU4-41P-201ENST00000364426 143 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.338-201ENST00000365320 114 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.363-201ENST00000365529 113 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNU6-926P-201ENST00000384075 107 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 MT-TL1-201ENST00000386347 75 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNU6-910P-201ENST00000390844 107 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNU6-1156P-201ENST00000410365 100 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNA5SP511-201ENST00000410487 115 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.646-201ENST00000410980 101 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNU6-1054P-201ENST00000411293 104 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNU6-1278P-201ENST00000516130 107 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.691-201ENST00000516611 103 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.76□□□□□ -2.29
HLA-DQA1P01909 MIR3124-201ENST00000582636 67 ntBASIC0.76□□□□□ -2.29
HLA-DQA1P01909 RNY3P11-201ENST00000364153 102 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.248-201ENST00000364501 109 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 SNORD81.2-201ENST00000365153 76 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.327-201ENST00000365201 102 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 SNORA2.2-201ENST00000365473 135 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 SNORA70.7-201ENST00000384159 133 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 RNU6-310P-201ENST00000384655 107 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 RNU11-5P-201ENST00000391216 129 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 RNA5SP482-201ENST00000391269 118 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 MTND4P28-201ENST00000426217 387 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC104332.1-201ENST00000440471 797 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC092473.1-201ENST00000441098 221 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 RPEP5-201ENST00000441137 268 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC087343.1-201ENST00000477341 475 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC022493.2-201ENST00000506122 481 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 RNU6-1096P-201ENST00000517089 102 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC023442.1-201ENST00000531247 422 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 AC098679.4-201ENST00000624241 654 ntBASIC0.75□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.101-201ENST00000363154 102 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-1188P-201ENST00000363795 107 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-1187P-201ENST00000364771 110 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-1310P-201ENST00000384153 107 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 MIR562-201ENST00000384894 95 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 MIR222-201ENST00000384992 110 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 SNORA69.1-201ENST00000390904 137 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-876P-201ENST00000391295 104 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AL451046.2-201ENST00000403074 277 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.592-201ENST00000410274 109 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.619-201ENST00000410951 90 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-370P-201ENST00000411008 104 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AC245047.7-201ENST00000440265 293 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 HSPE1P13-201ENST00000451143 297 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RPS23P4-201ENST00000487908 423 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU6-307P-201ENST00000516743 106 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU2-12P-201ENST00000517216 168 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 AC092794.1-201ENST00000612734 582 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 TPTEP1-208ENST00000636884 213 ntBASIC0.74□□□□□ -2.29
HLA-DQA1P01909 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
HLA-DQA1P01909 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.166-201ENST00000363730 102 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 SNORD115-30-201ENST00000364117 82 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RNU6-1080P-201ENST00000383982 107 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.577-201ENST00000384794 101 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 MIR526A1-201ENST00000384897 85 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 MIR520G-201ENST00000385064 90 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.599-201ENST00000410489 109 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.73□□□□□ -2.29
HLA-DQA1P01909 AL354751.2-201ENST00000415471 210 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.73□□□□□ -2.29
HLA-DQA1P01909 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RPL30P15-201ENST00000457129 321 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 Y_RNA.635-201ENST00000459041 101 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RNU7-169P-201ENST00000459456 61 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RNU6-237P-201ENST00000515985 71 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 RNU6-1337P-201ENST00000516525 95 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 MIR2355-201ENST00000517199 87 ntBASIC0.73□□□□□ -2.29
HLA-DQA1P01909 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.73□□□□□ -2.29
HLA-DQA1P01909 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms