Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.777-201ENST00000516982 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 RNU1-117P-201ENST00000517041 158 ntBASIC2.05□□□□□ -2.08
LDLRP01130 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.05□□□□□ -2.08
LDLRP01130 AP002001.1-203ENST00000534002 267 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
LDLRP01130 AC026271.5-201ENST00000577873 130 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.05□□□□□ -2.08
LDLRP01130 AC078899.2-201ENST00000595282 212 ntBASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.771-201ENST00000598668 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AL031274.2-201ENST00000599419 203 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AC022441.3-201ENST00000605737 136 ntBASIC2.05□□□□□ -2.08
LDLRP01130 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.05□□□□□ -2.08
LDLRP01130 Y_RNA.789-201ENST00000622480 102 ntBASIC2.05□□□□□ -2.08
LDLRP01130 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.05□□□□□ -2.08
LDLRP01130 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
LDLRP01130 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LDLRP01130 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
LDLRP01130 Y_RNA.383-201ENST00000383855 97 ntBASIC2.04□□□□□ -2.08
LDLRP01130 RNU6-1289P-201ENST00000384431 106 ntBASIC2.04□□□□□ -2.08
LDLRP01130 RNU6-21P-201ENST00000384710 107 ntBASIC2.04□□□□□ -2.08
LDLRP01130 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.04□□□□□ -2.08
LDLRP01130 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
LDLRP01130 RNY3P16-201ENST00000516338 101 ntBASIC2.04□□□□□ -2.08
LDLRP01130 RNU6-789P-201ENST00000517105 102 ntBASIC2.04□□□□□ -2.08
LDLRP01130 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
LDLRP01130 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
LDLRP01130 MIR3910-1-201ENST00000580936 111 ntBASIC2.04□□□□□ -2.08
LDLRP01130 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
LDLRP01130 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
LDLRP01130 AC010999.1-201ENST00000611856 324 ntBASIC2.04□□□□□ -2.08
LDLRP01130 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.04□□□□□ -2.08
LDLRP01130 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
LDLRP01130 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.04□□□□□ -2.08
LDLRP01130 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LDLRP01130 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LDLRP01130 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.08
LDLRP01130 Y_RNA.217-201ENST00000364214 105 ntBASIC2.03□□□□□ -2.08
LDLRP01130 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
LDLRP01130 Y_RNA.331-201ENST00000365267 102 ntBASIC2.03□□□□□ -2.08
LDLRP01130 SNORA19-201ENST00000384737 128 ntBASIC2.03□□□□□ -2.08
LDLRP01130 U8.13-201ENST00000390842 128 ntBASIC2.03□□□□□ -2.08
LDLRP01130 RNU6-918P-201ENST00000391219 106 ntBASIC2.03□□□□□ -2.08
LDLRP01130 RNU2-61P-201ENST00000411069 191 ntBASIC2.03□□□□□ -2.08
LDLRP01130 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.03□□□□□ -2.08
LDLRP01130 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.03□□□□□ -2.08
LDLRP01130 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LDLRP01130 Y_RNA.641-201ENST00000459414 105 ntBASIC2.03□□□□□ -2.08
LDLRP01130 AC091179.3-201ENST00000474761 144 ntBASIC2.03□□□□□ -2.08
LDLRP01130 AC018448.1-201ENST00000552843 316 ntBASIC2.03□□□□□ -2.08
LDLRP01130 MIR4308-201ENST00000580634 81 ntBASIC2.03□□□□□ -2.08
LDLRP01130 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
LDLRP01130 AC005176.2-201ENST00000596933 147 ntBASIC2.03□□□□□ -2.08
LDLRP01130 Z83818.1-201ENST00000603584 150 ntBASIC2.03□□□□□ -2.08
LDLRP01130 AC021753.1-201ENST00000635724 168 ntBASIC2.03□□□□□ -2.08
LDLRP01130 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LDLRP01130 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LDLRP01130 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
LDLRP01130 SNORA25.1-201ENST00000362326 128 ntBASIC2.02□□□□□ -2.09
LDLRP01130 SNORD31B-201ENST00000364977 69 ntBASIC2.02□□□□□ -2.09
LDLRP01130 RNU6-245P-201ENST00000384020 107 ntBASIC2.02□□□□□ -2.09
LDLRP01130 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
LDLRP01130 SRIP3-201ENST00000413200 219 ntBASIC2.02□□□□□ -2.09
LDLRP01130 AL390729.2-201ENST00000416137 156 ntBASIC2.02□□□□□ -2.09
LDLRP01130 UQCRBP2-201ENST00000447827 297 ntBASIC2.02□□□□□ -2.09
LDLRP01130 AC007395.1-201ENST00000451333 677 ntBASIC2.02□□□□□ -2.09
LDLRP01130 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.02□□□□□ -2.09
LDLRP01130 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.02□□□□□ -2.09
LDLRP01130 MIR3145-201ENST00000580727 82 ntBASIC2.02□□□□□ -2.09
LDLRP01130 MIR4781-201ENST00000585250 76 ntBASIC2.02□□□□□ -2.09
LDLRP01130 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
LDLRP01130 AC006001.4-201ENST00000622243 395 ntBASIC2.02□□□□□ -2.09
LDLRP01130 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.02□□□□□ -2.09
LDLRP01130 RNU1-17P-201ENST00000363022 152 ntBASIC2.01□□□□□ -2.09
LDLRP01130 Y_RNA.170-201ENST00000363746 110 ntBASIC2.01□□□□□ -2.09
LDLRP01130 Y_RNA.179-201ENST00000363844 90 ntBASIC2.01□□□□□ -2.09
LDLRP01130 RNU6-1305P-201ENST00000364353 104 ntBASIC2.01□□□□□ -2.09
LDLRP01130 RNU6-923P-201ENST00000364753 107 ntBASIC2.01□□□□□ -2.09
LDLRP01130 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
LDLRP01130 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LDLRP01130 MTCO2P33-201ENST00000402100 465 ntBASIC2.01□□□□□ -2.09
LDLRP01130 Y_RNA.590-201ENST00000410140 107 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.01□□□□□ -2.09
LDLRP01130 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.01□□□□□ -2.09
LDLRP01130 RAB28P5-201ENST00000427490 651 ntBASIC2.01□□□□□ -2.09
LDLRP01130 POLR2KP2-201ENST00000438155 177 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.01□□□□□ -2.09
LDLRP01130 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
LDLRP01130 RNU6-191P-201ENST00000516295 94 ntBASIC2.01□□□□□ -2.09
LDLRP01130 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.01□□□□□ -2.09
LDLRP01130 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
LDLRP01130 MIR4287-201ENST00000579398 78 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC072026.1-201ENST00000605023 201 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC005828.6-201ENST00000606610 232 ntBASIC2.01□□□□□ -2.09
LDLRP01130 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
LDLRP01130 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms