Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-205P-201ENST00000390858 107 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 RNU6-747P-201ENST00000390928 104 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 RNU6-241P-201ENST00000391148 104 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.36□□□□□ -2.47
ABCA1O95477 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.36□□□□□ -2.47
ABCA1O95477 MTATP6P23-201ENST00000440153 476 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.36□□□□□ -2.47
ABCA1O95477 MTND1P5-201ENST00000517906 940 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.36□□□□□ -2.47
ABCA1O95477 MIR4432-201ENST00000581823 84 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AC011921.3-201ENST00000605540 361 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 AL139418.1-201ENST00000613613 177 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 SCARNA4-201ENST00000629045 128 ntBASIC-0.36□□□□□ -2.47
ABCA1O95477 RNU6-266P-201ENST00000364225 107 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 RNU6-715P-201ENST00000365204 103 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 SNORD38C-201ENST00000384381 69 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 MT-TN-201ENST00000387400 73 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 MTCO2P33-201ENST00000402100 465 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 MTND3P9-201ENST00000429526 346 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 SCARNA17-201ENST00000516183 144 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 MTND1P35-201ENST00000526739 508 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 AC018448.1-201ENST00000552843 316 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 AC018462.2-201ENST00000605375 395 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 uc_338.36-201ENST00000622331 158 ntBASIC-0.37□□□□□ -2.47
ABCA1O95477 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 RNU6-727P-201ENST00000363592 107 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 RNU6-108P-201ENST00000365558 107 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 AL139396.1-201ENST00000421137 167 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.38□□□□□ -2.47
ABCA1O95477 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.38□□□□□ -2.47
ABCA1O95477 AC022616.3-201ENST00000523940 148 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 SNORD11B-201ENST00000607707 90 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 MIR644A-201ENST00000385262 94 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.38□□□□□ -2.47
ABCA1O95477 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.38□□□□□ -2.47
ABCA1O95477 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.38□□□□□ -2.47
ABCA1O95477 AC005771.1-201ENST00000585581 349 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 AC018714.1-201ENST00000605028 208 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 RNU6-85P-201ENST00000605989 107 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 AC006504.8-201ENST00000621046 635 ntBASIC-0.38□□□□□ -2.47
ABCA1O95477 RNU6-161P-201ENST00000363051 106 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 RNU6-933P-201ENST00000384424 107 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 MIR516B2-201ENST00000385190 85 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 MIR1285-2-201ENST00000408311 88 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AC112204.1-201ENST00000502591 103 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC116562.3-201ENST00000506136 177 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC091133.4-201ENST00000511142 308 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC068587.5-201ENST00000528506 175 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC090897.1-201ENST00000580909 226 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC068790.2-201ENST00000602601 557 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AC009159.2-201ENST00000617603 606 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 U4.2-201ENST00000618561 85 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC022306.3-201ENST00000619930 550 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 SEPT14P19-203ENST00000633205 211 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AC005592.1-201ENST00000566527 1640 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 SNORD73A-201ENST00000386062 65 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AC114755.3-201ENST00000481111 251 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.39□□□□□ -2.47
ABCA1O95477 AC006600.1-201ENST00000572529 153 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 MIR6740-201ENST00000618268 113 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 AC099654.13-201ENST00000639774 207 ntBASIC-0.39□□□□□ -2.47
ABCA1O95477 SNORD114-7-201ENST00000362520 77 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-784P-201ENST00000384330 106 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 snoU13.2-201ENST00000459201 104 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 AC116353.2-201ENST00000505332 712 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-612P-201ENST00000516909 102 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RBM11P1-201ENST00000604951 799 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 uc_338.4-201ENST00000616635 176 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 AL162376.1-201ENST00000624117 175 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 MIR365A-201ENST00000362260 87 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU4-32P-201ENST00000363404 141 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNA5SP205-201ENST00000364653 136 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-550P-201ENST00000391057 101 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RPL39P5-202ENST00000512505 151 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU6-897P-201ENST00000517135 105 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 RNU2-60P-201ENST00000517290 128 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 uc_338.28-201ENST00000612082 187 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 AC027807.2-201ENST00000616099 408 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 AC098679.4-201ENST00000624241 654 ntBASIC-0.4□□□□□ -2.47
ABCA1O95477 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
ABCA1O95477 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 MTCYBP36-201ENST00000404146 440 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 MTCO1P5-201ENST00000433573 344 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.41□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms