Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RNU6-926P-201ENST00000384075 107 ntBASIC1.4□□□□□ -2.19
SIX3O95343 Y_RNA.577-201ENST00000384794 101 ntBASIC1.4□□□□□ -2.19
SIX3O95343 MIR628-201ENST00000385229 95 ntBASIC1.4□□□□□ -2.19
SIX3O95343 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
SIX3O95343 Y_RNA.646-201ENST00000410980 101 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RAB28P5-201ENST00000427490 651 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RNU7-169P-201ENST00000459456 61 ntBASIC1.4□□□□□ -2.19
SIX3O95343 RNU7-128P-201ENST00000517247 62 ntBASIC1.4□□□□□ -2.19
SIX3O95343 AP003033.1-201ENST00000527244 415 ntBASIC1.4□□□□□ -2.19
SIX3O95343 AC113139.1-201ENST00000605049 239 ntBASIC1.4□□□□□ -2.19
SIX3O95343 AC073349.3-201ENST00000617616 186 ntBASIC1.4□□□□□ -2.19
SIX3O95343 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SIX3O95343 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIX3O95343 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIX3O95343 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
SIX3O95343 RNU6-310P-201ENST00000384655 107 ntBASIC1.39□□□□□ -2.19
SIX3O95343 RNU6-1105P-201ENST00000384774 107 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AL355796.1-201ENST00000406706 323 ntBASIC1.39□□□□□ -2.19
SIX3O95343 MTND4P28-201ENST00000426217 387 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AC233266.1-201ENST00000454518 96 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.39□□□□□ -2.19
SIX3O95343 RNU6-408P-201ENST00000515910 100 ntBASIC1.39□□□□□ -2.19
SIX3O95343 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
SIX3O95343 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
SIX3O95343 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AC242852.1-201ENST00000612151 96 ntBASIC1.39□□□□□ -2.19
SIX3O95343 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AL627230.5-201ENST00000619807 58 ntBASIC1.39□□□□□ -2.19
SIX3O95343 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
SIX3O95343 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
SIX3O95343 AC244015.1-201ENST00000622301 99 ntBASIC1.39□□□□□ -2.19
SIX3O95343 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIX3O95343 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SIX3O95343 RNU1-22P-201ENST00000363334 158 ntBASIC1.38□□□□□ -2.19
SIX3O95343 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
SIX3O95343 RNU6-1188P-201ENST00000363795 107 ntBASIC1.38□□□□□ -2.19
SIX3O95343 Y_RNA.259-201ENST00000364619 101 ntBASIC1.38□□□□□ -2.19
SIX3O95343 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
SIX3O95343 Y_RNA.314-201ENST00000365114 102 ntBASIC1.38□□□□□ -2.19
SIX3O95343 Y_RNA.384-201ENST00000383909 102 ntBASIC1.38□□□□□ -2.19
SIX3O95343 RNY1P4-201ENST00000384595 115 ntBASIC1.38□□□□□ -2.19
SIX3O95343 SNORA75.6-201ENST00000391318 127 ntBASIC1.38□□□□□ -2.19
SIX3O95343 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX3O95343 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX3O95343 RNU6-120P-201ENST00000516077 103 ntBASIC1.38□□□□□ -2.19
SIX3O95343 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
SIX3O95343 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SIX3O95343 MIR6788-201ENST00000618842 66 ntBASIC1.38□□□□□ -2.19
SIX3O95343 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
SIX3O95343 AC099654.14-201ENST00000638599 341 ntBASIC1.38□□□□□ -2.19
SIX3O95343 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SIX3O95343 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
SIX3O95343 SNORA27.1-201ENST00000362604 124 ntBASIC1.37□□□□□ -2.19
SIX3O95343 RNU6-1301P-201ENST00000362724 104 ntBASIC1.37□□□□□ -2.19
SIX3O95343 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
SIX3O95343 RNU6-890P-201ENST00000384121 107 ntBASIC1.37□□□□□ -2.19
SIX3O95343 RNU6-318P-201ENST00000384283 103 ntBASIC1.37□□□□□ -2.19
SIX3O95343 RNU6-1297P-201ENST00000384415 104 ntBASIC1.37□□□□□ -2.19
SIX3O95343 SNRPGP13-201ENST00000442212 177 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.37□□□□□ -2.19
SIX3O95343 AC091021.1-201ENST00000468051 388 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AC105758.1-201ENST00000506038 399 ntBASIC1.37□□□□□ -2.19
SIX3O95343 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AC006380.1-201ENST00000603598 186 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AC080078.3-201ENST00000605407 463 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AC025253.1-201ENST00000613623 543 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
SIX3O95343 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.37□□□□□ -2.19
SIX3O95343 AL513423.1-201ENST00000621695 132 ntBASIC1.37□□□□□ -2.19
SIX3O95343 AC127459.3-201ENST00000624328 466 ntBASIC1.37□□□□□ -2.19
SIX3O95343 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
SIX3O95343 RNU4-76P-201ENST00000364509 141 ntBASIC1.36□□□□□ -2.19
SIX3O95343 Y_RNA.592-201ENST00000410274 109 ntBASIC1.36□□□□□ -2.19
SIX3O95343 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
SIX3O95343 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.36□□□□□ -2.19
SIX3O95343 SUMO1P2-201ENST00000452524 304 ntBASIC1.36□□□□□ -2.19
SIX3O95343 RPS29P1-201ENST00000465274 159 ntBASIC1.36□□□□□ -2.19
SIX3O95343 RPL30P7-201ENST00000479312 323 ntBASIC1.36□□□□□ -2.19
SIX3O95343 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.36□□□□□ -2.19
SIX3O95343 AL512310.8-201ENST00000550183 120 ntBASIC1.36□□□□□ -2.19
SIX3O95343 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
SIX3O95343 MIR4778-201ENST00000577635 80 ntBASIC1.36□□□□□ -2.19
SIX3O95343 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
SIX3O95343 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
SIX3O95343 U6.115-201ENST00000636045 103 ntBASIC1.36□□□□□ -2.19
SIX3O95343 AL589743.1-201ENST00000551932 2712 ntBASIC1.36□□□□□ -2.19
SIX3O95343 Y_RNA.142-201ENST00000363491 102 ntBASIC1.35□□□□□ -2.19
SIX3O95343 RNU6-53P-201ENST00000365367 106 ntBASIC1.35□□□□□ -2.19
SIX3O95343 RNU6-136P-201ENST00000384663 107 ntBASIC1.35□□□□□ -2.19
SIX3O95343 MIR873-201ENST00000401120 77 ntBASIC1.35□□□□□ -2.19
SIX3O95343 AC138393.2-201ENST00000414742 246 ntBASIC1.35□□□□□ -2.19
SIX3O95343 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.35□□□□□ -2.19
SIX3O95343 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
SIX3O95343 RNU6-470P-201ENST00000515954 104 ntBASIC1.35□□□□□ -2.19
SIX3O95343 RNU6-1291P-201ENST00000516591 104 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms